Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28211593

Identifier: 28211593

GI number: 28211593

Start: 2092849

End: 2093514

Strand: Direct

Name: 28211593

Synonym: CTC01967

Alternate gene names: NA

Gene position: 2092849-2093514 (Clockwise)

Preceding gene: 28211583

Following gene: 28211596

Centisome position: 74.76

GC content: 22.22

Gene sequence:

>666_bases
ATGCTTTTCTTTAGCAAAAAAGTTAATGAGAAAACTATAAGTGATATAGAAGAAATTGTTAATAAATATGAAGATGAATT
CAATAAATGTTATGTACCTTTAAATGCTCTAAATTTATGGTATTTAGAAGGTAATAACTTCTTAGATAACTTGTATGGTA
ATGAATTAGAAAATTTCGACTTGTCAATTTTATATGATTATAAAAATACTACTCTAAAAAATTGTTTGGATGAACATCCT
AAAGTTAGAAAATCTTTTTTTTATGCTTTAAATAATATAAAACAAAGTAAACAATTATATTATTTAAATGATCTTTTAGA
TTTTTTAAGGTCTAAAGGAAAAATGTTTGTAGATAACTATTTAAAAGACTTCCAAAAGTCCTCTAACAAATATAAAAAGA
GTATAGAAAAACAGAAATTGCCTGAATATAGAAATCTTTTGGCATGGATAGAAGATGACAAGTTACATTTTTTAGATAAA
TTATTTGTTTATTTAGGTAAGTATTCAATCCCTTTAGATAATATAGTAGAATTTTATACTGATAATGATATAGCTAGAGC
AGTATTGGTTTATAATGAAAATAATGAAGTTAAAAATATGAATTTTAATTTATCTTCCTTCGATACTTTAGAAAACTTAT
TACCCTTTAAAGCAAAAGTAGATTAA

Upstream 100 bases:

>100_bases
TATTTATGCATAACTTATTGATAATGTTCGTGTATATCCTCTAGTTTTATATATTTATTTATGCTAAAATTATAGATATA
TTCTACAAGGAGTTGATTAA

Downstream 100 bases:

>100_bases
ATTAAAAAAGAAGATGTAGAAATTAACCTACATCTTCTTTTTTGTACTTGTACTCTCTCCACTATTTATAAAACTTTTCT
TAGCTCCTCTGCTGGATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MLFFSKKVNEKTISDIEEIVNKYEDEFNKCYVPLNALNLWYLEGNNFLDNLYGNELENFDLSILYDYKNTTLKNCLDEHP
KVRKSFFYALNNIKQSKQLYYLNDLLDFLRSKGKMFVDNYLKDFQKSSNKYKKSIEKQKLPEYRNLLAWIEDDKLHFLDK
LFVYLGKYSIPLDNIVEFYTDNDIARAVLVYNENNEVKNMNFNLSSFDTLENLLPFKAKVD

Sequences:

>Translated_221_residues
MLFFSKKVNEKTISDIEEIVNKYEDEFNKCYVPLNALNLWYLEGNNFLDNLYGNELENFDLSILYDYKNTTLKNCLDEHP
KVRKSFFYALNNIKQSKQLYYLNDLLDFLRSKGKMFVDNYLKDFQKSSNKYKKSIEKQKLPEYRNLLAWIEDDKLHFLDK
LFVYLGKYSIPLDNIVEFYTDNDIARAVLVYNENNEVKNMNFNLSSFDTLENLLPFKAKVD
>Mature_221_residues
MLFFSKKVNEKTISDIEEIVNKYEDEFNKCYVPLNALNLWYLEGNNFLDNLYGNELENFDLSILYDYKNTTLKNCLDEHP
KVRKSFFYALNNIKQSKQLYYLNDLLDFLRSKGKMFVDNYLKDFQKSSNKYKKSIEKQKLPEYRNLLAWIEDDKLHFLDK
LFVYLGKYSIPLDNIVEFYTDNDIARAVLVYNENNEVKNMNFNLSSFDTLENLLPFKAKVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26452; Mature: 26452

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFFSKKVNEKTISDIEEIVNKYEDEFNKCYVPLNALNLWYLEGNNFLDNLYGNELENFD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEECCCHHHHHCCCCCCCCC
LSILYDYKNTTLKNCLDEHPKVRKSFFYALNNIKQSKQLYYLNDLLDFLRSKGKMFVDNY
EEEEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LKDFQKSSNKYKKSIEKQKLPEYRNLLAWIEDDKLHFLDKLFVYLGKYSIPLDNIVEFYT
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHC
DNDIARAVLVYNENNEVKNMNFNLSSFDTLENLLPFKAKVD
CCCCEEEEEEECCCCCEEECCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLFFSKKVNEKTISDIEEIVNKYEDEFNKCYVPLNALNLWYLEGNNFLDNLYGNELENFD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEECCCHHHHHCCCCCCCCC
LSILYDYKNTTLKNCLDEHPKVRKSFFYALNNIKQSKQLYYLNDLLDFLRSKGKMFVDNY
EEEEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LKDFQKSSNKYKKSIEKQKLPEYRNLLAWIEDDKLHFLDKLFVYLGKYSIPLDNIVEFYT
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHC
DNDIARAVLVYNENNEVKNMNFNLSSFDTLENLLPFKAKVD
CCCCEEEEEEECCCCCEEECCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA