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The map label for this gene is yrdA [C]

Identifier: 28211337

GI number: 28211337

Start: 1795631

End: 1796128

Strand: Direct

Name: yrdA [C]

Synonym: CTC01682

Alternate gene names: 28211337

Gene position: 1795631-1796128 (Clockwise)

Preceding gene: 28211335

Following gene: 28211347

Centisome position: 64.15

GC content: 28.92

Gene sequence:

>498_bases
GTGATTAGAAATTTTAATAATAAGACACCAAAAATACATAGTAATTCTTTTATAGAAAGTACTTCTTGCATAATAGGAGA
TGTAACCATAGAAGATAATGTTAGTATATGGTTTAATGCTGTTTTAAGAGCAGATCATAATAGTATTTATGTAGGTAAAA
ATAGTAACATTCAAGATAATTGTACTTTACACATAGATACCAATTTTAAAGTGAAAATAGGAGAAAGTGTTACAGTGGGA
CATAACTCTATACTGCATGGTTGTGAAATAGGAAATAATACTTTAATAGGAATGGGTAGTATTATTTTAAATGGCGCTAA
AATTGGAGAAAACGCTATAGTAGGAGCTGGCACATTGATTCCGCAGGGAAAAACTTTTCCATCTGGTGTACTTTTACTAG
GAAGTCCTGCTAAAATTATAAGAAATTTAACTTCTGAAGAAATAGAAAACATAAAAAAATCTTCTGATGAGTATGTAAAA
CTTTCCAAAACATATTGA

Upstream 100 bases:

>100_bases
AATTATTATGATTCTATCCAAATTACAATTTTATAATCAATTTATTAAAATTTGATATAATAATAATTAGTTATTCACTA
TAAAAAGGGAGGTTTTAATC

Downstream 100 bases:

>100_bases
TTTTAAAAAAGGGGCTGTCACATTAAGAATAAATGCTACAATATATTGTATGTAAATTCTTTAGTGTGATAGTCCCTTTA
AATTTATTATCATACATCCA

Product: ferripyochelin binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MIRNFNNKTPKIHSNSFIESTSCIIGDVTIEDNVSIWFNAVLRADHNSIYVGKNSNIQDNCTLHIDTNFKVKIGESVTVG
HNSILHGCEIGNNTLIGMGSIILNGAKIGENAIVGAGTLIPQGKTFPSGVLLLGSPAKIIRNLTSEEIENIKKSSDEYVK
LSKTY

Sequences:

>Translated_165_residues
MIRNFNNKTPKIHSNSFIESTSCIIGDVTIEDNVSIWFNAVLRADHNSIYVGKNSNIQDNCTLHIDTNFKVKIGESVTVG
HNSILHGCEIGNNTLIGMGSIILNGAKIGENAIVGAGTLIPQGKTFPSGVLLLGSPAKIIRNLTSEEIENIKKSSDEYVK
LSKTY
>Mature_165_residues
MIRNFNNKTPKIHSNSFIESTSCIIGDVTIEDNVSIWFNAVLRADHNSIYVGKNSNIQDNCTLHIDTNFKVKIGESVTVG
HNSILHGCEIGNNTLIGMGSIILNGAKIGENAIVGAGTLIPQGKTFPSGVLLLGSPAKIIRNLTSEEIENIKKSSDEYVK
LSKTY

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=173, Percent_Identity=42.7745664739884, Blast_Score=149, Evalue=8e-38,
Organism=Escherichia coli, GI1787667, Length=157, Percent_Identity=40.1273885350318, Blast_Score=128, Evalue=2e-31,
Organism=Escherichia coli, GI87081681, Length=157, Percent_Identity=36.3057324840764, Blast_Score=117, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17872; Mature: 17872

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRNFNNKTPKIHSNSFIESTSCIIGDVTIEDNVSIWFNAVLRADHNSIYVGKNSNIQDN
CCCCCCCCCCEECCCCCCCCCCEEEEEEEEECCCEEEEEEEEECCCCEEEEECCCCCCCC
CTLHIDTNFKVKIGESVTVGHNSILHGCEIGNNTLIGMGSIILNGAKIGENAIVGAGTLI
EEEEECCCEEEEECCEEEECCCCEEEEEECCCCEEEEECEEEEECCCCCCCEEEECCEEC
PQGKTFPSGVLLLGSPAKIIRNLTSEEIENIKKSSDEYVKLSKTY
CCCCCCCCCEEEECCHHHHHHHCCHHHHHHHHCCCCCEEEEEECC
>Mature Secondary Structure
MIRNFNNKTPKIHSNSFIESTSCIIGDVTIEDNVSIWFNAVLRADHNSIYVGKNSNIQDN
CCCCCCCCCCEECCCCCCCCCCEEEEEEEEECCCEEEEEEEEECCCCEEEEECCCCCCCC
CTLHIDTNFKVKIGESVTVGHNSILHGCEIGNNTLIGMGSIILNGAKIGENAIVGAGTLI
EEEEECCCEEEEECCEEEECCCCEEEEEECCCCEEEEECEEEEECCCCCCCEEEECCEEC
PQGKTFPSGVLLLGSPAKIIRNLTSEEIENIKKSSDEYVKLSKTY
CCCCCCCCCEEEECCHHHHHHHCCHHHHHHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]