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The map label for this gene is degV

Identifier: 28211335

GI number: 28211335

Start: 1794353

End: 1795093

Strand: Direct

Name: degV

Synonym: CTC01680

Alternate gene names: NA

Gene position: 1794353-1795093 (Clockwise)

Preceding gene: 28211308

Following gene: 28211337

Centisome position: 64.1

GC content: 28.21

Gene sequence:

>741_bases
ATGAGTCATGAAAAGTTTTATAATGAATTACGAAAGGGTGAATTATCAACTACATCTCAAATAAACGCCTATTCTTTTAG
AAAATGTTTTGAAGAACTTATAAAAGAAAATAAATCTATATTATATTTAGGATTTTCTTCTGTTTTAAGTGGATGCATAA
ATAGTGCAGAAATTGCTAAAAATGAACTTTTAGAAGAATACCCTAAGGCAGATATAACAATTATTAATACTAAAAGTGCC
GCTATTGGCCAAGGACTTTTAATACTTAAGGCAGTAGAAATGCTAAAAAAGGGATCATCTAAAGAAAATATTATATCTTG
GATAGAAACTTATAAATATAATATGAATCATTGGTTTATTGTAGATGATTTAATGTATTTAAAAAGAGGTGGAAGGCTTT
CAACATTTTCTTCTGCTATAGGAACTTTGATGAATGTAAAACCTATGCTAACTCTAAATAATGAAGGTGCTATAGTAAAT
ACAGCTAATATCCGTGGAAGAAAAAAAGCAATAAAATCTCTTTTAGAAGTATATGAGAAAAATAGAGAGAACTTTGAAGA
TGAAACCATTGGCATAAGTCATAGTGATTGTTTGGAAGATGCCCAGTATCTAAAGGAACTAATTTTAGAAAAATACAATA
TTAAAAATATATTAATTGGTTCTATAGGTCCTGTAATAGGCTCTCACACAGGACCAAATGCCTTGACTTTATGCTTTTTA
GGAAAGAAAAGAGAAAATTAA

Upstream 100 bases:

>100_bases
TGATTTACCTTTATAATATATAGAGGAGAACAACATAAAATTTTTAAGCTTAACTTATAATTTAAGTTATGGAAGCTTTC
CAGATGATTTTGGCAAAACC

Downstream 100 bases:

>100_bases
AAAAATATGGAGAAATTAAAACTTCTCCATATTTTTTACTTTAACTAATTTTCACATTATCTTTTTCATTGGTTTCTTCT
TTTTTCTTACCATAATCTAA

Product: putative DegV protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSHEKFYNELRKGELSTTSQINAYSFRKCFEELIKENKSILYLGFSSVLSGCINSAEIAKNELLEEYPKADITIINTKSA
AIGQGLLILKAVEMLKKGSSKENIISWIETYKYNMNHWFIVDDLMYLKRGGRLSTFSSAIGTLMNVKPMLTLNNEGAIVN
TANIRGRKKAIKSLLEVYEKNRENFEDETIGISHSDCLEDAQYLKELILEKYNIKNILIGSIGPVIGSHTGPNALTLCFL
GKKREN

Sequences:

>Translated_246_residues
MSHEKFYNELRKGELSTTSQINAYSFRKCFEELIKENKSILYLGFSSVLSGCINSAEIAKNELLEEYPKADITIINTKSA
AIGQGLLILKAVEMLKKGSSKENIISWIETYKYNMNHWFIVDDLMYLKRGGRLSTFSSAIGTLMNVKPMLTLNNEGAIVN
TANIRGRKKAIKSLLEVYEKNRENFEDETIGISHSDCLEDAQYLKELILEKYNIKNILIGSIGPVIGSHTGPNALTLCFL
GKKREN
>Mature_245_residues
SHEKFYNELRKGELSTTSQINAYSFRKCFEELIKENKSILYLGFSSVLSGCINSAEIAKNELLEEYPKADITIINTKSAA
IGQGLLILKAVEMLKKGSSKENIISWIETYKYNMNHWFIVDDLMYLKRGGRLSTFSSAIGTLMNVKPMLTLNNEGAIVNT
ANIRGRKKAIKSLLEVYEKNRENFEDETIGISHSDCLEDAQYLKELILEKYNIKNILIGSIGPVIGSHTGPNALTLCFLG
KKREN

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 27729; Mature: 27598

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHEKFYNELRKGELSTTSQINAYSFRKCFEELIKENKSILYLGFSSVLSGCINSAEIAK
CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCHHHHHH
NELLEEYPKADITIINTKSAAIGQGLLILKAVEMLKKGSSKENIISWIETYKYNMNHWFI
HHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEE
VDDLMYLKRGGRLSTFSSAIGTLMNVKPMLTLNNEGAIVNTANIRGRKKAIKSLLEVYEK
HHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHH
NRENFEDETIGISHSDCLEDAQYLKELILEKYNIKNILIGSIGPVIGSHTGPNALTLCFL
HHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHCCCCCCCEEEEEEE
GKKREN
CCCCCC
>Mature Secondary Structure 
SHEKFYNELRKGELSTTSQINAYSFRKCFEELIKENKSILYLGFSSVLSGCINSAEIAK
CHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCHHHHHH
NELLEEYPKADITIINTKSAAIGQGLLILKAVEMLKKGSSKENIISWIETYKYNMNHWFI
HHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEE
VDDLMYLKRGGRLSTFSSAIGTLMNVKPMLTLNNEGAIVNTANIRGRKKAIKSLLEVYEK
HHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHH
NRENFEDETIGISHSDCLEDAQYLKELILEKYNIKNILIGSIGPVIGSHTGPNALTLCFL
HHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHCCCCCCCEEEEEEE
GKKREN
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842 [H]