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The map label for this gene is hopD2 [H]

Identifier: 28211272

GI number: 28211272

Start: 1729341

End: 1730264

Strand: Direct

Name: hopD2 [H]

Synonym: CTC01609

Alternate gene names: 28211272

Gene position: 1729341-1730264 (Clockwise)

Preceding gene: 28211269

Following gene: 28211299

Centisome position: 61.78

GC content: 25.87

Gene sequence:

>924_bases
TTGAATAGAAAATTTAAAATTTATATATCTTCTTTTTTAATATTTTTAAGTATTTTTTTATCCTTATCTATGGAATCTAC
ATTGGCATACACTTCAGATACCACTAATTTAAATCTTGTTTTAGATACATCAAAGTATACTGACATGCCAAAGAGATTTC
GTAAAACATCTAATTTAGAAAATATAAAAAACAATAATATAAATCTTAATGGGCTTGATAAACTAAATATTTCTGGTAGC
CAGCAATTTTCTGCGTATAATTTACCTCTTATAATAAAAAGCATAGAAACTTCTTTACCTATAACAGTTGTTGACTTAAG
AGAAGAATCTCATGGTTTTATTAATGGTATGCCTGTTAGTTGGGTTAGCGAAAAAAATAATGCTAATATGGGTTTAACTA
GAGATGAAATTATCTCAAAAGAAATTAATCTATTAAATAGCATTAAATTAAATGTGCCTATTACTTTTTATAATCACAAA
AATATAACTATAATTCCAACAAATGTAGAAAATGAAGATACACTTGTTACTTCTAACTCATTATCTTATCTTCGTGTTCC
CGTTACCGATACTAAACTACCTACAGATGATATGGTTAATTATTTTGTTGATTCAATAAAATCAACACCTAAAGATACAT
GGTTCCATTTTCATTGTAAACAAGGCATCGGTAGAACTTCTACATTTATGATTATGTATGATATGATTAAAAATTCAAAA
GAAGTTTCATTTGATGATATTGTACGAAGACAATTATTGCTAGCAGGCTTTAATGAAGATAAAATTAAATCCTTTAGCAA
TAACAAAAGAATTGCTTTTCTAAAAAACTTCTATAGGTACTGTAAAGAAAATAGTGATAATTTCGATGTTAAATGGAGTG
ATTGGAAGAAAACTATTGCCATTAAAAATACGATAAAGTTTTAA

Upstream 100 bases:

>100_bases
ATTAATTATACATATTCTTACCTGTATACAAAGTATATAGTTAACATATCCTATACTTAAATTAAAATACTATTAGTTAA
TGTAAATGAGGTGAAAATAA

Downstream 100 bases:

>100_bases
ACATTGTAAAAAAGCTTGAATTATTTCAAGCTTTTTGTATATCTAATATTAATTCAATTGGACAATGATCTGATCCGAGC
ACCTCTGTATGTATTTTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: Tyrosine-protein phosphatase hopPtoD2 [H]

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MNRKFKIYISSFLIFLSIFLSLSMESTLAYTSDTTNLNLVLDTSKYTDMPKRFRKTSNLENIKNNNINLNGLDKLNISGS
QQFSAYNLPLIIKSIETSLPITVVDLREESHGFINGMPVSWVSEKNNANMGLTRDEIISKEINLLNSIKLNVPITFYNHK
NITIIPTNVENEDTLVTSNSLSYLRVPVTDTKLPTDDMVNYFVDSIKSTPKDTWFHFHCKQGIGRTSTFMIMYDMIKNSK
EVSFDDIVRRQLLLAGFNEDKIKSFSNNKRIAFLKNFYRYCKENSDNFDVKWSDWKKTIAIKNTIKF

Sequences:

>Translated_307_residues
MNRKFKIYISSFLIFLSIFLSLSMESTLAYTSDTTNLNLVLDTSKYTDMPKRFRKTSNLENIKNNNINLNGLDKLNISGS
QQFSAYNLPLIIKSIETSLPITVVDLREESHGFINGMPVSWVSEKNNANMGLTRDEIISKEINLLNSIKLNVPITFYNHK
NITIIPTNVENEDTLVTSNSLSYLRVPVTDTKLPTDDMVNYFVDSIKSTPKDTWFHFHCKQGIGRTSTFMIMYDMIKNSK
EVSFDDIVRRQLLLAGFNEDKIKSFSNNKRIAFLKNFYRYCKENSDNFDVKWSDWKKTIAIKNTIKF
>Mature_307_residues
MNRKFKIYISSFLIFLSIFLSLSMESTLAYTSDTTNLNLVLDTSKYTDMPKRFRKTSNLENIKNNNINLNGLDKLNISGS
QQFSAYNLPLIIKSIETSLPITVVDLREESHGFINGMPVSWVSEKNNANMGLTRDEIISKEINLLNSIKLNVPITFYNHK
NITIIPTNVENEDTLVTSNSLSYLRVPVTDTKLPTDDMVNYFVDSIKSTPKDTWFHFHCKQGIGRTSTFMIMYDMIKNSK
EVSFDDIVRRQLLLAGFNEDKIKSFSNNKRIAFLKNFYRYCKENSDNFDVKWSDWKKTIAIKNTIKF

Specific function: Effector showing tyrosine-phosphatase activity required for host defense suppression. Functions inside plant cells causing suppression of HR (hypersensitive response), PR1 gene expression and oxidative burst probably by interfering with a MAPK (mitogen- a

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted. Note=Secreted via type III secretion system (TTSS) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tyrosine-protein phosphatase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000387
- InterPro:   IPR016130
- InterPro:   IPR000242 [H]

Pfam domain/function: PF00102 Y_phosphatase [H]

EC number: =3.1.3.48 [H]

Molecular weight: Translated: 35510; Mature: 35510

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS00383 TYR_PHOSPHATASE_1 ; PS50056 TYR_PHOSPHATASE_2 ; PS00501 SPASE_I_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKFKIYISSFLIFLSIFLSLSMESTLAYTSDTTNLNLVLDTSKYTDMPKRFRKTSNLE
CCCEEEEHHHHHHHHHHHHHHHCCCHHEEEECCCCEEEEEEECCHHCCHHHHHHHHCCCC
NIKNNNINLNGLDKLNISGSQQFSAYNLPLIIKSIETSLPITVVDLREESHGFINGMPVS
CCCCCCEEECCCEEECCCCCCCEEEECCCEEEEECCCCCCEEEEEECCCCCCEECCCCEE
WVSEKNNANMGLTRDEIISKEINLLNSIKLNVPITFYNHKNITIIPTNVENEDTLVTSNS
EECCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEEEEECCEEEEEECCCCCCCEEEEECC
LSYLRVPVTDTKLPTDDMVNYFVDSIKSTPKDTWFHFHCKQGIGRTSTFMIMYDMIKNSK
CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEHEEEEEHHCCCC
EVSFDDIVRRQLLLAGFNEDKIKSFSNNKRIAFLKNFYRYCKENSDNFDVKWSDWKKTIA
CCCHHHHHHHHHHHCCCCHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCEEEECCCCEEEE
IKNTIKF
EEEECCC
>Mature Secondary Structure
MNRKFKIYISSFLIFLSIFLSLSMESTLAYTSDTTNLNLVLDTSKYTDMPKRFRKTSNLE
CCCEEEEHHHHHHHHHHHHHHHCCCHHEEEECCCCEEEEEEECCHHCCHHHHHHHHCCCC
NIKNNNINLNGLDKLNISGSQQFSAYNLPLIIKSIETSLPITVVDLREESHGFINGMPVS
CCCCCCEEECCCEEECCCCCCCEEEECCCEEEEECCCCCCEEEEEECCCCCCEECCCCEE
WVSEKNNANMGLTRDEIISKEINLLNSIKLNVPITFYNHKNITIIPTNVENEDTLVTSNS
EECCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEEEEECCEEEEEECCCCCCCEEEEECC
LSYLRVPVTDTKLPTDDMVNYFVDSIKSTPKDTWFHFHCKQGIGRTSTFMIMYDMIKNSK
CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEHEEEEEHHCCCC
EVSFDDIVRRQLLLAGFNEDKIKSFSNNKRIAFLKNFYRYCKENSDNFDVKWSDWKKTIA
CCCHHHHHHHHHHHCCCCHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCEEEECCCCEEEE
IKNTIKF
EEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12437299; 12828636; 12928499 [H]