Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

Click here to switch to the map view.

The map label for this gene is 28211093

Identifier: 28211093

GI number: 28211093

Start: 1527459

End: 1527860

Strand: Direct

Name: 28211093

Synonym: CTC01416

Alternate gene names: NA

Gene position: 1527459-1527860 (Clockwise)

Preceding gene: 28211092

Following gene: 28211102

Centisome position: 54.57

GC content: 27.11

Gene sequence:

>402_bases
TTGTTATTTATCGTGGCAAAGAGGTTGAATGAAAGAATAAGTGATTTTGCAAATGCATTCTCTAGACTACAAGAAGCTTT
TAAAAAAGATATTGATGATGATATAATAATAGATGGTATTATCCAAAGGTTTGAATTTACATTTGAACAAAGTTGGAAGG
TTATGAAGTTATATCTAGAAGATCAAGGTATATTAGATGAAGCCTTGTCTCCTAGAAGCACTATCCGATTAGCTTTTAAA
TATAAAATAATTTCTGATGGAGATATATGGATTCAAATGATGTTAGATAGAAATAGGACATCTCATATGTATGATGAAAC
TATAGCTAAGAATATAGTTAAAAGAATTAAGGATACTTATATGAAAGAATTTACAAAATTACAAGATTTTTTACAAAGGT
AA

Upstream 100 bases:

>100_bases
TTTTATATAGAGGATTTAGATACATGCTTAATGTTTGATATATTAGCATTCAACGAATTAACTAAAAAAGATTTAATAAA
AAATATATTAAATGAAGGAG

Downstream 100 bases:

>100_bases
TATTTCATACACATCCAAGTTCTACAAAGCTATTTTTATGTAATGAAGAGGACGTAGAGTAATAGGGATATCAACCCCTA
TTACTCTTTACTTTCCCATC

Product: nucleotidyltransferase

Products: NA

Alternate protein names: Nucleotidyltransferase Fused Substrate-Bimding Domain

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MLFIVAKRLNERISDFANAFSRLQEAFKKDIDDDIIIDGIIQRFEFTFEQSWKVMKLYLEDQGILDEALSPRSTIRLAFK
YKIISDGDIWIQMMLDRNRTSHMYDETIAKNIVKRIKDTYMKEFTKLQDFLQR

Sequences:

>Translated_133_residues
MLFIVAKRLNERISDFANAFSRLQEAFKKDIDDDIIIDGIIQRFEFTFEQSWKVMKLYLEDQGILDEALSPRSTIRLAFK
YKIISDGDIWIQMMLDRNRTSHMYDETIAKNIVKRIKDTYMKEFTKLQDFLQR
>Mature_133_residues
MLFIVAKRLNERISDFANAFSRLQEAFKKDIDDDIIIDGIIQRFEFTFEQSWKVMKLYLEDQGILDEALSPRSTIRLAFK
YKIISDGDIWIQMMLDRNRTSHMYDETIAKNIVKRIKDTYMKEFTKLQDFLQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15985; Mature: 15985

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFIVAKRLNERISDFANAFSRLQEAFKKDIDDDIIIDGIIQRFEFTFEQSWKVMKLYLE
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQGILDEALSPRSTIRLAFKYKIISDGDIWIQMMLDRNRTSHMYDETIAKNIVKRIKDTY
CCCCHHHHCCCHHHEEEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
MKEFTKLQDFLQR
HHHHHHHHHHHCC
>Mature Secondary Structure
MLFIVAKRLNERISDFANAFSRLQEAFKKDIDDDIIIDGIIQRFEFTFEQSWKVMKLYLE
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQGILDEALSPRSTIRLAFKYKIISDGDIWIQMMLDRNRTSHMYDETIAKNIVKRIKDTY
CCCCHHHHCCCHHHEEEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
MKEFTKLQDFLQR
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA