| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28211038
Identifier: 28211038
GI number: 28211038
Start: 1458595
End: 1459791
Strand: Direct
Name: 28211038
Synonym: CTC01358
Alternate gene names: NA
Gene position: 1458595-1459791 (Clockwise)
Preceding gene: 28211037
Following gene: 28211041
Centisome position: 52.11
GC content: 26.23
Gene sequence:
>1197_bases ATGCTTTCGTTAATGAAAAATGAATTTATAAAGGTAACATGGAAAAAAAAGAGTATTTTTTTTATGATAGCTTTTATACT TCTATTATCTCTTCTTACTGTGTCTGGTTATAAGTCCAATGAAGAGTTTAAAAGACAAAATACACCTGAAGCTAAATTAG AGTATTTAAAAAGTCATAAGGAAAATTTAATTAAAGAAAAAAACTTAACCAAAGAGAAGGAATACATTAAAGACTTCCAA AAGGATTTAGAAAATATAAATAAAGATATTTTGAAATTAGAAGCAATAATTAAATCCAATGTGAAAGAAGATTATTGGAA AATAACCACAAAGGAATCTATTGAAAGAAAAGAGCAAATGCTTAAAGAAGATAATATTAGTAATACGGAAAAACTTAGAG AAAAAAGAGAAATAGAAAGGTTAAATATTCTTCTAGAGAAGGATATACCTCCTATGGAAGGAGAATTTAACGCCTTTAAC TTTATAGAAATAGTTGTTAATGAAGTTTTAGGATATTTTTTATTAGCTGTAGCTATAGTATTATTTTTCTCTGATATTGT ATCAGGTGAATGTACTCCTCCAACTTTAAAGCTTTTACTAGTCCAACCTGTATCCAGGGGTAAAATATTACTATCGAAAT TTTTAACCTCCACTATATATTCGTTGGTTTTTATATACTTGATAGAATTCATATTCTTTATAATAGTTGGATCTATCTCT AGCTTTGGTAATGCTGATTATCCTGTATTTATGGGAACTATTTATAAATTAAATCCTTTAGTTAGTGATAAATCTAAGCT TTTAATAGAAGTTATAAACTCCACTAAAATGATCCCTATATGGAAAAACACTTTATATCTTTTATTACATCAAGGTCTTT TTATAGTAGCTTGTTCTGCTTTTTCTTTACTTATGTCTGTAATAACTAAAAGTAATATAGGTTCTTTAATTTTTGGAGTT TTATCTATAATTATTACATCTATTTTAACTGCATTATTTAAACCCTTAGCTAAATTATCTCATTTATTCTTTTTCACTTA TGGTCCAAGTGGTGATCTATTTAGTGGACGACTTGCTACTATAGCTACTAATCCTAATATTACAATAGGAAACTCCATTA TTTGTTTAGTAATCTGGACAATAGCTTGCTATTTAATAGCTTATATTATTTTTACAAAGGAAGACATACTAATATAA
Upstream 100 bases:
>100_bases AAGAATTAGTTCAACTTAATGTGGATATCAAAGAAGTTTATAGAGAACATAAAATATTAGAAGAAAGATATATGGAGCTT ATGGAAGGAGGACAATTGTA
Downstream 100 bases:
>100_bases TGAACAATGAATAATTTAGGAAGCTCTTCTTCCCTTTAGGTAGAAGAGCTTTAATTTTATTATATTTTAAAATATATTCA TTCTATTGAAAGCTCGTTTA
Product: putative permease
Products: NA
Alternate protein names: Permease; ABC Transporter-Like Membrane Protein; Related ABC Transporter Permease Component; Lipoprotein
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MLSLMKNEFIKVTWKKKSIFFMIAFILLLSLLTVSGYKSNEEFKRQNTPEAKLEYLKSHKENLIKEKNLTKEKEYIKDFQ KDLENINKDILKLEAIIKSNVKEDYWKITTKESIERKEQMLKEDNISNTEKLREKREIERLNILLEKDIPPMEGEFNAFN FIEIVVNEVLGYFLLAVAIVLFFSDIVSGECTPPTLKLLLVQPVSRGKILLSKFLTSTIYSLVFIYLIEFIFFIIVGSIS SFGNADYPVFMGTIYKLNPLVSDKSKLLIEVINSTKMIPIWKNTLYLLLHQGLFIVACSAFSLLMSVITKSNIGSLIFGV LSIIITSILTALFKPLAKLSHLFFFTYGPSGDLFSGRLATIATNPNITIGNSIICLVIWTIACYLIAYIIFTKEDILI
Sequences:
>Translated_398_residues MLSLMKNEFIKVTWKKKSIFFMIAFILLLSLLTVSGYKSNEEFKRQNTPEAKLEYLKSHKENLIKEKNLTKEKEYIKDFQ KDLENINKDILKLEAIIKSNVKEDYWKITTKESIERKEQMLKEDNISNTEKLREKREIERLNILLEKDIPPMEGEFNAFN FIEIVVNEVLGYFLLAVAIVLFFSDIVSGECTPPTLKLLLVQPVSRGKILLSKFLTSTIYSLVFIYLIEFIFFIIVGSIS SFGNADYPVFMGTIYKLNPLVSDKSKLLIEVINSTKMIPIWKNTLYLLLHQGLFIVACSAFSLLMSVITKSNIGSLIFGV LSIIITSILTALFKPLAKLSHLFFFTYGPSGDLFSGRLATIATNPNITIGNSIICLVIWTIACYLIAYIIFTKEDILI >Mature_398_residues MLSLMKNEFIKVTWKKKSIFFMIAFILLLSLLTVSGYKSNEEFKRQNTPEAKLEYLKSHKENLIKEKNLTKEKEYIKDFQ KDLENINKDILKLEAIIKSNVKEDYWKITTKESIERKEQMLKEDNISNTEKLREKREIERLNILLEKDIPPMEGEFNAFN FIEIVVNEVLGYFLLAVAIVLFFSDIVSGECTPPTLKLLLVQPVSRGKILLSKFLTSTIYSLVFIYLIEFIFFIIVGSIS SFGNADYPVFMGTIYKLNPLVSDKSKLLIEVINSTKMIPIWKNTLYLLLHQGLFIVACSAFSLLMSVITKSNIGSLIFGV LSIIITSILTALFKPLAKLSHLFFFTYGPSGDLFSGRLATIATNPNITIGNSIICLVIWTIACYLIAYIIFTKEDILI
Specific function: Unknown
COG id: COG1277
COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45536; Mature: 45536
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSLMKNEFIKVTWKKKSIFFMIAFILLLSLLTVSGYKSNEEFKRQNTPEAKLEYLKSHK CCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHH ENLIKEKNLTKEKEYIKDFQKDLENINKDILKLEAIIKSNVKEDYWKITTKESIERKEQM HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHH LKEDNISNTEKLREKREIERLNILLEKDIPPMEGEFNAFNFIEIVVNEVLGYFLLAVAIV HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LFFSDIVSGECTPPTLKLLLVQPVSRGKILLSKFLTSTIYSLVFIYLIEFIFFIIVGSIS HHHHHHHCCCCCCHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFGNADYPVFMGTIYKLNPLVSDKSKLLIEVINSTKMIPIWKNTLYLLLHQGLFIVACSA HCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHH FSLLMSVITKSNIGSLIFGVLSIIITSILTALFKPLAKLSHLFFFTYGPSGDLFSGRLAT HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEE IATNPNITIGNSIICLVIWTIACYLIAYIIFTKEDILI EECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLSLMKNEFIKVTWKKKSIFFMIAFILLLSLLTVSGYKSNEEFKRQNTPEAKLEYLKSHK CCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHH ENLIKEKNLTKEKEYIKDFQKDLENINKDILKLEAIIKSNVKEDYWKITTKESIERKEQM HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHH LKEDNISNTEKLREKREIERLNILLEKDIPPMEGEFNAFNFIEIVVNEVLGYFLLAVAIV HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LFFSDIVSGECTPPTLKLLLVQPVSRGKILLSKFLTSTIYSLVFIYLIEFIFFIIVGSIS HHHHHHHCCCCCCHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFGNADYPVFMGTIYKLNPLVSDKSKLLIEVINSTKMIPIWKNTLYLLLHQGLFIVACSA HCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHH FSLLMSVITKSNIGSLIFGVLSIIITSILTALFKPLAKLSHLFFFTYGPSGDLFSGRLAT HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEE IATNPNITIGNSIICLVIWTIACYLIAYIIFTKEDILI EECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA