| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is yeeE [H]
Identifier: 28210871
GI number: 28210871
Start: 1259735
End: 1261075
Strand: Direct
Name: yeeE [H]
Synonym: CTC01179
Alternate gene names: 28210871
Gene position: 1259735-1261075 (Clockwise)
Preceding gene: 28210870
Following gene: 28210873
Centisome position: 45.0
GC content: 32.96
Gene sequence:
>1341_bases TTGCCCCTTTTATATGAAATAATAATGAGAATAGGAAGTGAGCAAGGTATTATGAGTAAAAAGGAGACATCTGGATTAGA GTTGGCAGAAAACACTAGTAAAGTTGAATTGGTTTCTACAGATAAGAAACAAACATATATAGGACTAGCACTTTTAATAG CATTAAGTATATTCGGATCATTCCAATATGCAAAAGATTCTAAATTGGCATTATTCTTAATTACAGGACTAGCAGTTGGA TATGTTATGCAAAGATCAAGATTTGGTTTTGCAGGTGGCGTAAAGAAAATATATGTAACAGGAGACGGTACCTTAACAAA GGCCCTAATGTTTTTATTTGCTATAACTTTATTAATTACGGCAGCAATTCATTATGGAGCTTTTATGGCAGGAGCAAAAA TTCCAGGAGCATCTTCTGTTAAACCAACAAACTTAGGGACAGTAATTGGTGGAGTATTATTTGGTATCGGTATGATGTTT GGGGGAGGATGTGCTTCCGGAACATTAACAGACTCAGGTGAAGGTGAAATAAGAGCATTTATAGTATTATTTTTCTTTGT AACTGGATCATTAATTGGTGTAAAACACATGCCATGGTGGGAACAAAGTATATTCTTTAAATTAGGAGGAAAAGTTTATC TTCCAGATACATTTGGATATTTAGGATCTATTATAGTATCACTTTTAGGATTTTTACTAATTTATGTTATAACTATGAAA TATGAAGCTAAAAGAAAAAGAGAAAACACTTATACAAAGGAAGAATACAGTGACTGGGAAAAACCATTACCAGAAACTAC AGACTACAAATTCTTCAGTGAAAGAACTTATCACAAATTCTTTATACAAAGATGGTCTTTCTACACAGGAGCAGTATGTT TAACTATTATGTTTATTGCAATACTTGTTACAACAGGAAAGAGCTGGGGTGTAACCTCAACTTTCGCAGATTGGGGAGCT TGGTTATATCAAAGCGTAGGAATAGTTGATGTTTCAAATTGGCCATGGTTTGCAAGCAGAATGAAGAAAATAAATGGAGG ATTCTTAAATGATCCATCTTCCATGAGAAATATAGGAATATTATTAGGAGCAACATTATCATTATTATTAGCAAGAAGAT TTTCCTTTAAGAAAAACTTCAAATTTAGAGATGTAGTATTCTATGCAATTGGTGGATTAATAATGGGATATGGAGCTAGA GTTGGATTAGGATGTAACGCAGGTGCATTATATTCAGCGATATGTAACTTCTCTCTATCAGGATGGGTATTCCTTCCAGC AATGACTGTAGGAGGAATAATAGGAGTTAATTTAGTTAAAAAATTCAATGTAACAATTTAA
Upstream 100 bases:
>100_bases GGAATATCCTTCTATGAATATTTCAATGATCAAACAACAGGAAGAGAAAAAATAGTTACAGACTACAATTTCTTATAATA TTAAAAAATAGGGGCTTTAA
Downstream 100 bases:
>100_bases TTAAATATATAAAAAGATAGGTGAATAGTTAAGGATGATTTTTAGATGAAAATTAAGAGAAACATCCATAACTATTCATT ATTTATTATGGGAAAATAAC
Product: transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MPLLYEIIMRIGSEQGIMSKKETSGLELAENTSKVELVSTDKKQTYIGLALLIALSIFGSFQYAKDSKLALFLITGLAVG YVMQRSRFGFAGGVKKIYVTGDGTLTKALMFLFAITLLITAAIHYGAFMAGAKIPGASSVKPTNLGTVIGGVLFGIGMMF GGGCASGTLTDSGEGEIRAFIVLFFFVTGSLIGVKHMPWWEQSIFFKLGGKVYLPDTFGYLGSIIVSLLGFLLIYVITMK YEAKRKRENTYTKEEYSDWEKPLPETTDYKFFSERTYHKFFIQRWSFYTGAVCLTIMFIAILVTTGKSWGVTSTFADWGA WLYQSVGIVDVSNWPWFASRMKKINGGFLNDPSSMRNIGILLGATLSLLLARRFSFKKNFKFRDVVFYAIGGLIMGYGAR VGLGCNAGALYSAICNFSLSGWVFLPAMTVGGIIGVNLVKKFNVTI
Sequences:
>Translated_446_residues MPLLYEIIMRIGSEQGIMSKKETSGLELAENTSKVELVSTDKKQTYIGLALLIALSIFGSFQYAKDSKLALFLITGLAVG YVMQRSRFGFAGGVKKIYVTGDGTLTKALMFLFAITLLITAAIHYGAFMAGAKIPGASSVKPTNLGTVIGGVLFGIGMMF GGGCASGTLTDSGEGEIRAFIVLFFFVTGSLIGVKHMPWWEQSIFFKLGGKVYLPDTFGYLGSIIVSLLGFLLIYVITMK YEAKRKRENTYTKEEYSDWEKPLPETTDYKFFSERTYHKFFIQRWSFYTGAVCLTIMFIAILVTTGKSWGVTSTFADWGA WLYQSVGIVDVSNWPWFASRMKKINGGFLNDPSSMRNIGILLGATLSLLLARRFSFKKNFKFRDVVFYAIGGLIMGYGAR VGLGCNAGALYSAICNFSLSGWVFLPAMTVGGIIGVNLVKKFNVTI >Mature_445_residues PLLYEIIMRIGSEQGIMSKKETSGLELAENTSKVELVSTDKKQTYIGLALLIALSIFGSFQYAKDSKLALFLITGLAVGY VMQRSRFGFAGGVKKIYVTGDGTLTKALMFLFAITLLITAAIHYGAFMAGAKIPGASSVKPTNLGTVIGGVLFGIGMMFG GGCASGTLTDSGEGEIRAFIVLFFFVTGSLIGVKHMPWWEQSIFFKLGGKVYLPDTFGYLGSIIVSLLGFLLIYVITMKY EAKRKRENTYTKEEYSDWEKPLPETTDYKFFSERTYHKFFIQRWSFYTGAVCLTIMFIAILVTTGKSWGVTSTFADWGAW LYQSVGIVDVSNWPWFASRMKKINGGFLNDPSSMRNIGILLGATLSLLLARRFSFKKNFKFRDVVFYAIGGLIMGYGARV GLGCNAGALYSAICNFSLSGWVFLPAMTVGGIIGVNLVKKFNVTI
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0394 family [H]
Homologues:
Organism=Escherichia coli, GI1788323, Length=371, Percent_Identity=28.0323450134771, Blast_Score=81, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007272 [H]
Pfam domain/function: PF04143 DUF395 [H]
EC number: NA
Molecular weight: Translated: 49053; Mature: 48922
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLLYEIIMRIGSEQGIMSKKETSGLELAENTSKVELVSTDKKQTYIGLALLIALSIFGS CCHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHC FQYAKDSKLALFLITGLAVGYVMQRSRFGFAGGVKKIYVTGDGTLTKALMFLFAITLLIT CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH AAIHYGAFMAGAKIPGASSVKPTNLGTVIGGVLFGIGMMFGGGCASGTLTDSGEGEIRAF HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH IVLFFFVTGSLIGVKHMPWWEQSIFFKLGGKVYLPDTFGYLGSIIVSLLGFLLIYVITMK HHHHHHHHCCHHCCCCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH YEAKRKRENTYTKEEYSDWEKPLPETTDYKFFSERTYHKFFIQRWSFYTGAVCLTIMFIA HHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILVTTGKSWGVTSTFADWGAWLYQSVGIVDVSNWPWFASRMKKINGGFLNDPSSMRNIGI HHHHCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHH LLGATLSLLLARRFSFKKNFKFRDVVFYAIGGLIMGYGARVGLGCNAGALYSAICNFSLS HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCC GWVFLPAMTVGGIIGVNLVKKFNVTI CCEEEHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PLLYEIIMRIGSEQGIMSKKETSGLELAENTSKVELVSTDKKQTYIGLALLIALSIFGS CHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHC FQYAKDSKLALFLITGLAVGYVMQRSRFGFAGGVKKIYVTGDGTLTKALMFLFAITLLIT CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH AAIHYGAFMAGAKIPGASSVKPTNLGTVIGGVLFGIGMMFGGGCASGTLTDSGEGEIRAF HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH IVLFFFVTGSLIGVKHMPWWEQSIFFKLGGKVYLPDTFGYLGSIIVSLLGFLLIYVITMK HHHHHHHHCCHHCCCCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH YEAKRKRENTYTKEEYSDWEKPLPETTDYKFFSERTYHKFFIQRWSFYTGAVCLTIMFIA HHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILVTTGKSWGVTSTFADWGAWLYQSVGIVDVSNWPWFASRMKKINGGFLNDPSSMRNIGI HHHHCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHH LLGATLSLLLARRFSFKKNFKFRDVVFYAIGGLIMGYGARVGLGCNAGALYSAICNFSLS HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCC GWVFLPAMTVGGIIGVNLVKKFNVTI CCEEEHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]