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The map label for this gene is yedE [H]

Identifier: 28210868

GI number: 28210868

Start: 1255919

End: 1256446

Strand: Direct

Name: yedE [H]

Synonym: CTC01176

Alternate gene names: 28210868

Gene position: 1255919-1256446 (Clockwise)

Preceding gene: 28210867

Following gene: 28210870

Centisome position: 44.87

GC content: 31.25

Gene sequence:

>528_bases
ATGGAGAACATTAAAAAGTGGATAAAAAAGCCATGGCCTTATTGGGTAGGAGGCGTACTACTTGGAATTCTAAATATAAT
TTTATTATGGACAACTGGTACTAGTTGGCATATAACTAGTGGCTTTTTATTATGGGCTGTTGGAGTTTTACAATGGCTTG
GTTTAGAGCCTTTAAAATGGGAATATTTCACTTACCTTCAACATAATTATCAATCAATAATTGAAAATAATAATTTATTT
ATAAATAAATATACTATTTTAAATATGGGGACGGTTATAGGTGCATTGATTGCCACTTTATTAGCATCACAATTTAAATG
GAAAAAGATAAAAGATAAAAAACAGGTTTTATTTGCACTTTTAGGAGGAGTTATGATGGGATATGGCACCAGACTTGCTT
TTGGTTGTTCTGTAGGTAGTTTTTTTAGTGGGGTTCCATCCTTTTCTCTTCATGCATGGGTTTTTGGTATATTCATTACC
CTTGGAGCATGGATAGGAGTTAAAATAATAATAAAATTTTTATCATAG

Upstream 100 bases:

>100_bases
AATGGGGAGGAAAAAATAATTATCCAGTAAAAGTTGTTGAATTGGAAGGTGGATATTGGGACGTTTATATCCAAAAACCT
AAATAAAAAGGAGTAAAGGT

Downstream 100 bases:

>100_bases
GAGGACTTGGTCCTCCTTAAGTTTTAACAAAATCCTCTTTTATTAGAAATGATAAAGTCCACAAATGTTTGTTCATAAGA
GGTAAGTCTATAGTTTTTTC

Product: membrane spanning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MENIKKWIKKPWPYWVGGVLLGILNIILLWTTGTSWHITSGFLLWAVGVLQWLGLEPLKWEYFTYLQHNYQSIIENNNLF
INKYTILNMGTVIGALIATLLASQFKWKKIKDKKQVLFALLGGVMMGYGTRLAFGCSVGSFFSGVPSFSLHAWVFGIFIT
LGAWIGVKIIIKFLS

Sequences:

>Translated_175_residues
MENIKKWIKKPWPYWVGGVLLGILNIILLWTTGTSWHITSGFLLWAVGVLQWLGLEPLKWEYFTYLQHNYQSIIENNNLF
INKYTILNMGTVIGALIATLLASQFKWKKIKDKKQVLFALLGGVMMGYGTRLAFGCSVGSFFSGVPSFSLHAWVFGIFIT
LGAWIGVKIIIKFLS
>Mature_175_residues
MENIKKWIKKPWPYWVGGVLLGILNIILLWTTGTSWHITSGFLLWAVGVLQWLGLEPLKWEYFTYLQHNYQSIIENNNLF
INKYTILNMGTVIGALIATLLASQFKWKKIKDKKQVLFALLGGVMMGYGTRLAFGCSVGSFFSGVPSFSLHAWVFGIFIT
LGAWIGVKIIIKFLS

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

Organism=Escherichia coli, GI1788238, Length=165, Percent_Identity=30.9090909090909, Blast_Score=77, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 19866; Mature: 19866

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENIKKWIKKPWPYWVGGVLLGILNIILLWTTGTSWHITSGFLLWAVGVLQWLGLEPLKW
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
EYFTYLQHNYQSIIENNNLFINKYTILNMGTVIGALIATLLASQFKWKKIKDKKQVLFAL
HHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGVMMGYGTRLAFGCSVGSFFSGVPSFSLHAWVFGIFITLGAWIGVKIIIKFLS
HHHHHHHCCCHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MENIKKWIKKPWPYWVGGVLLGILNIILLWTTGTSWHITSGFLLWAVGVLQWLGLEPLKW
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
EYFTYLQHNYQSIIENNNLFINKYTILNMGTVIGALIATLLASQFKWKKIKDKKQVLFAL
HHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGVMMGYGTRLAFGCSVGSFFSGVPSFSLHAWVFGIFITLGAWIGVKIIIKFLS
HHHHHHHCCCHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8371104; 9097040; 9278503 [H]