Click here to switch to the map view.

The map label for this gene is 28210840

Identifier: 28210840

GI number: 28210840

Start: 1215272

End: 1215829

Strand: Direct

Name: 28210840

Synonym: CTC01147

Alternate gene names: NA

Gene position: 1215272-1215829 (Clockwise)

Preceding gene: 28210839

Following gene: 28210841

Centisome position: 43.41

GC content: 25.27

Gene sequence:

>558_bases
ATGGTGAAACAACAAGAAGTTCAAATATATGGTAATAGATTAGAATTAAGTGGGGGTGAAAAAGTGAAAAAGGAAATTAC
AGGGGTAATGATTTATTACTATAAGGTTTGCAAAAGAAAGTTGTGGTATTTTTATAATGAAATACAGATGGAACAAGGAA
ATGAAAGTGTTGAGATAGGTAAAGCGATAGATGAAGAAACTTATAGGCGAGATAAAAAGCACATAAATATAGATAACATA
ATAAATATTGATTTTATACGTTCTAAAGGAATATTACATGAAGTTAAGAAAAGTAATAAAATAGAAGAAGCAAGTATATT
ACAAGTAAAATATTATTTATATTTTCTTAATAAAAGAGGTATAGAAAATATAAAAGGCAAAATAGATTATCCACTACTTA
AACAAAACATAGATGTTGAGTTAACAAGAGAAGATGTTACTATTATAGAAGGAATTTTAGATGATATACAAAATATAGTT
AAAGCTAGTAATCCTCCAAATTTAGAAAAAAAGAGGATATGTAAATCTTGTGCTTATTATGATCTATGCTTTATATAA

Upstream 100 bases:

>100_bases
GCTATAAATTATAATAAAATTTTATTAAGTAAGTATAAAAATGAGTACATTAAGGTTATTGAATGTAAATATGATGAAGC
TGGATATAAAAGAATTAAAT

Downstream 100 bases:

>100_bases
TAGGAAGGTGAAATTTTATGAAAAGAAGCTATTATATTTATAATAATGGGATACTAAAAAGAAAAGATAACTCTATGGCA
TTTATAGATGAGTTAGGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MVKQQEVQIYGNRLELSGGEKVKKEITGVMIYYYKVCKRKLWYFYNEIQMEQGNESVEIGKAIDEETYRRDKKHINIDNI
INIDFIRSKGILHEVKKSNKIEEASILQVKYYLYFLNKRGIENIKGKIDYPLLKQNIDVELTREDVTIIEGILDDIQNIV
KASNPPNLEKKRICKSCAYYDLCFI

Sequences:

>Translated_185_residues
MVKQQEVQIYGNRLELSGGEKVKKEITGVMIYYYKVCKRKLWYFYNEIQMEQGNESVEIGKAIDEETYRRDKKHINIDNI
INIDFIRSKGILHEVKKSNKIEEASILQVKYYLYFLNKRGIENIKGKIDYPLLKQNIDVELTREDVTIIEGILDDIQNIV
KASNPPNLEKKRICKSCAYYDLCFI
>Mature_185_residues
MVKQQEVQIYGNRLELSGGEKVKKEITGVMIYYYKVCKRKLWYFYNEIQMEQGNESVEIGKAIDEETYRRDKKHINIDNI
INIDFIRSKGILHEVKKSNKIEEASILQVKYYLYFLNKRGIENIKGKIDYPLLKQNIDVELTREDVTIIEGILDDIQNIV
KASNPPNLEKKRICKSCAYYDLCFI

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013343
- InterPro:   IPR022765 [H]

Pfam domain/function: PF01930 DUF83 [H]

EC number: NA

Molecular weight: Translated: 21840; Mature: 21840

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKQQEVQIYGNRLELSGGEKVKKEITGVMIYYYKVCKRKLWYFYNEIQMEQGNESVEIG
CCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHH
KAIDEETYRRDKKHINIDNIINIDFIRSKGILHEVKKSNKIEEASILQVKYYLYFLNKRG
HHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
IENIKGKIDYPLLKQNIDVELTREDVTIIEGILDDIQNIVKASNPPNLEKKRICKSCAYY
CCCCCCCCCCCHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
DLCFI
HEECC
>Mature Secondary Structure
MVKQQEVQIYGNRLELSGGEKVKKEITGVMIYYYKVCKRKLWYFYNEIQMEQGNESVEIG
CCCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHH
KAIDEETYRRDKKHINIDNIINIDFIRSKGILHEVKKSNKIEEASILQVKYYLYFLNKRG
HHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
IENIKGKIDYPLLKQNIDVELTREDVTIIEGILDDIQNIVKASNPPNLEKKRICKSCAYY
CCCCCCCCCCCHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
DLCFI
HEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]