| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210830
Identifier: 28210830
GI number: 28210830
Start: 1201292
End: 1202608
Strand: Direct
Name: 28210830
Synonym: CTC01136
Alternate gene names: NA
Gene position: 1201292-1202608 (Clockwise)
Preceding gene: 28210829
Following gene: 28210831
Centisome position: 42.91
GC content: 29.23
Gene sequence:
>1317_bases ATGAAAAATAAAGTAAAAAAAGTATTACCCTATAGTATAGGAGAAGAAGTGGGAGTTGAACCAGGAGATATAGTAAACTC CATAAATGGTGAAGCTATTAAGGATATATTAGATTATAAATTTCATATGGGCGATGATTTCATAGTATTGCAAGTTCAAA AGCCCTGTGGTGAAATATGGGATATAGAAATAGAAAAAGAATTTGGAGAAGATTTAGGAATAGAGTTTGAAGAAGGTATA ATGGATGAGGCCAGAAGCTGTCATAATAACTGCATGTTTTGCTTTATAGATCAGTTACCAGGAGGCATGAGAAAATCTTT ATACTTTAAAGATGATGACTCTAGACTTTCTTTTCTACAGGGTAATTTTGTTACCTTAACTAATATGAAGGATGAAGATA TAGATAGAATAATAAGGTATAGAATAAGTCCTATAAATGTATCTGTACATACAACGGATGGAGAACTAAGAAAAAAGATG CTAAACAATAGATTTGCAGATAATATATGGGAAAGACTTAAAAAACTTGCAGATGCGTCCATAACTTTAAATTGCCAAAT AGTTCTTTGTCCTGGAGTAAATGATGGAGATAATTTAAGGAAAACAGTAGAAGATCTTTATACACTATATCCTTCTGTAG AGAATATAGCAGTGGTTCCTATTGGAATAACCAAATATAGAGAGGGATTAGCTAAATTTAGTCCTTACAATGAAGATGGG GCAAGAGAACAGTTAAATACAGTAAAAAAACTTCAAGAAAAATATATAAAAGAAATAAGCACTCCTTTTGTTAGACTTTC CGATGAATTCTATGTAGTAGGAAAAGAAAACATACCTGACAAAGATTTTTACCAAGGTTTTGATCAAATTGAAGATGGTG TTGGAATGATTAGAATGTTAAGGGAAGAATTTAAAGAAACTCTTTCTAATCTAAATAGAAATTCAAAAGGTAGCTTTACA ATAGTAACAGGAGAGCTAGCTTTTAAAGAATTTTTAACAATAAAGGATGAAATAAAAAAAGTAAATGATAAAATAGAGAT AGGGGTTAAAAAAATTATTAATAATTTTTTTGGAGAAACTATAACTGTAGCAGGATTAATTACGGGAAGTGATATAAAAG AACAGTTGAAAAAAGAAGAAGTAAAAGACTATATATTAATACCTAGAAATATGTTAAAAGCTGATGAGGATATTTTCTTA GATGATGTAACTGTTAAAGAATTAGAAGAGTTTTATGGTAAAAGTATAATTATATGTGAGTATACAGGAGAGGATTTTAT AGAAATACTAAATGAATACAGCAAGGAGGAAAATTAA
Upstream 100 bases:
>100_bases TAACCCCTCTAATGATAATAATTGACTAAATAAAAATATTAATGTAATATAACTAAAGACAGATAATATTGCTGAAAACT GTTTATCAGGAGATGAATAT
Downstream 100 bases:
>100_bases ATGGGAAAACCAATAGTTGCAATAGTAGGAAGACCAAATGTAGGAAAATCTACACTATTTAATAAACTAGCAGGAAAAAG AATTGCTATAGTAGAGGATA
Product: Fe-S oxidoreductase
Products: NA
Alternate protein names: FeS-Containing Oxidoreductase; FeS-Containing Cyanobacterial-Specific Oxidoreductase; FeS-Containing-Specific Oxidoreductase; PDZ Domain Protein; FeS-Containing Organism-Specific Oxidoreductase; Response Regulator Receiver Protein; PDZ Domain-Containing Protein
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MKNKVKKVLPYSIGEEVGVEPGDIVNSINGEAIKDILDYKFHMGDDFIVLQVQKPCGEIWDIEIEKEFGEDLGIEFEEGI MDEARSCHNNCMFCFIDQLPGGMRKSLYFKDDDSRLSFLQGNFVTLTNMKDEDIDRIIRYRISPINVSVHTTDGELRKKM LNNRFADNIWERLKKLADASITLNCQIVLCPGVNDGDNLRKTVEDLYTLYPSVENIAVVPIGITKYREGLAKFSPYNEDG AREQLNTVKKLQEKYIKEISTPFVRLSDEFYVVGKENIPDKDFYQGFDQIEDGVGMIRMLREEFKETLSNLNRNSKGSFT IVTGELAFKEFLTIKDEIKKVNDKIEIGVKKIINNFFGETITVAGLITGSDIKEQLKKEEVKDYILIPRNMLKADEDIFL DDVTVKELEEFYGKSIIICEYTGEDFIEILNEYSKEEN
Sequences:
>Translated_438_residues MKNKVKKVLPYSIGEEVGVEPGDIVNSINGEAIKDILDYKFHMGDDFIVLQVQKPCGEIWDIEIEKEFGEDLGIEFEEGI MDEARSCHNNCMFCFIDQLPGGMRKSLYFKDDDSRLSFLQGNFVTLTNMKDEDIDRIIRYRISPINVSVHTTDGELRKKM LNNRFADNIWERLKKLADASITLNCQIVLCPGVNDGDNLRKTVEDLYTLYPSVENIAVVPIGITKYREGLAKFSPYNEDG AREQLNTVKKLQEKYIKEISTPFVRLSDEFYVVGKENIPDKDFYQGFDQIEDGVGMIRMLREEFKETLSNLNRNSKGSFT IVTGELAFKEFLTIKDEIKKVNDKIEIGVKKIINNFFGETITVAGLITGSDIKEQLKKEEVKDYILIPRNMLKADEDIFL DDVTVKELEEFYGKSIIICEYTGEDFIEILNEYSKEEN >Mature_438_residues MKNKVKKVLPYSIGEEVGVEPGDIVNSINGEAIKDILDYKFHMGDDFIVLQVQKPCGEIWDIEIEKEFGEDLGIEFEEGI MDEARSCHNNCMFCFIDQLPGGMRKSLYFKDDDSRLSFLQGNFVTLTNMKDEDIDRIIRYRISPINVSVHTTDGELRKKM LNNRFADNIWERLKKLADASITLNCQIVLCPGVNDGDNLRKTVEDLYTLYPSVENIAVVPIGITKYREGLAKFSPYNEDG AREQLNTVKKLQEKYIKEISTPFVRLSDEFYVVGKENIPDKDFYQGFDQIEDGVGMIRMLREEFKETLSNLNRNSKGSFT IVTGELAFKEFLTIKDEIKKVNDKIEIGVKKIINNFFGETITVAGLITGSDIKEQLKKEEVKDYILIPRNMLKADEDIFL DDVTVKELEEFYGKSIIICEYTGEDFIEILNEYSKEEN
Specific function: Unknown
COG id: COG1625
COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50363; Mature: 50363
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKVKKVLPYSIGEEVGVEPGDIVNSINGEAIKDILDYKFHMGDDFIVLQVQKPCGEIW CCCCHHHHCCCCCCHHCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCEE DIEIEKEFGEDLGIEFEEGIMDEARSCHNNCMFCFIDQLPGGMRKSLYFKDDDSRLSFLQ EEEEHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHCCEEECCCCCCCEEC GNFVTLTNMKDEDIDRIIRYRISPINVSVHTTDGELRKKMLNNRFADNIWERLKKLADAS CCEEEEECCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC ITLNCQIVLCPGVNDGDNLRKTVEDLYTLYPSVENIAVVPIGITKYREGLAKFSPYNEDG EEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCCCCC AREQLNTVKKLQEKYIKEISTPFVRLSDEFYVVGKENIPDKDFYQGFDQIEDGVGMIRML HHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH REEFKETLSNLNRNSKGSFTIVTGELAFKEFLTIKDEIKKVNDKIEIGVKKIINNFFGET HHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ITVAGLITGSDIKEQLKKEEVKDYILIPRNMLKADEDIFLDDVTVKELEEFYGKSIIICE EEEEEEEECHHHHHHHHHHHHHHEEECCHHHHCCCCCCEECCCCHHHHHHHHCCEEEEEE YTGEDFIEILNEYSKEEN ECCHHHHHHHHHHHCCCC >Mature Secondary Structure MKNKVKKVLPYSIGEEVGVEPGDIVNSINGEAIKDILDYKFHMGDDFIVLQVQKPCGEIW CCCCHHHHCCCCCCHHCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCEE DIEIEKEFGEDLGIEFEEGIMDEARSCHNNCMFCFIDQLPGGMRKSLYFKDDDSRLSFLQ EEEEHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHCCEEECCCCCCCEEC GNFVTLTNMKDEDIDRIIRYRISPINVSVHTTDGELRKKMLNNRFADNIWERLKKLADAS CCEEEEECCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC ITLNCQIVLCPGVNDGDNLRKTVEDLYTLYPSVENIAVVPIGITKYREGLAKFSPYNEDG EEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCCCCC AREQLNTVKKLQEKYIKEISTPFVRLSDEFYVVGKENIPDKDFYQGFDQIEDGVGMIRML HHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH REEFKETLSNLNRNSKGSFTIVTGELAFKEFLTIKDEIKKVNDKIEIGVKKIINNFFGET HHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ITVAGLITGSDIKEQLKKEEVKDYILIPRNMLKADEDIFLDDVTVKELEEFYGKSIIICE EEEEEEEECHHHHHHHHHHHHHHEEECCHHHHCCCCCCEECCCCHHHHHHHHCCEEEEEE YTGEDFIEILNEYSKEEN ECCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA