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The map label for this gene is sigG [H]

Identifier: 28210822

GI number: 28210822

Start: 1193354

End: 1193839

Strand: Direct

Name: sigG [H]

Synonym: CTC01128

Alternate gene names: 28210822

Gene position: 1193354-1193839 (Clockwise)

Preceding gene: 161486847

Following gene: 161486846

Centisome position: 42.63

GC content: 31.07

Gene sequence:

>486_bases
ATGATAATAGGAGAAATAAGAAGATATTTAAGGGACAATAATTCCATAAGGGTTAGTAGGTCTTTAAGGGATATAGCTTA
TAAAGCTTTACAAGTTAGAGATAAATTAATAGCTAAAAATGATAAAGAGCCTACTGTAAGTGAAATAGCAAAGGAATTAG
ATATACCTAGGGAAGATGTAGTTTTTGCTTTGGATGCTATACAAGATCCTCTATCATTATTTGAACCAATATATCAAGAT
GGAGGAGATTCTATATATGTTATGGATCAAATAAGCGATACTAAAAATTTAGATGATAGTTGGATAGAGAATATAGCCAT
AAAAGAAGCTATGAGAAATCTAAATAAGAGAGAGAAGCTGATATTGAGTCTAAGATTTTTTGATGGAAGAACTCAGATGG
AAGTAGCGGATGAAATAGGTATATCCCAAGCACAGGTATCAAGATTAGAGAAAACCGCACTCAAACATATGAGAAAATTT
GTTTAA

Upstream 100 bases:

>100_bases
TCCAGATGATCTTTTCCAAGTAGGATGTATAGGGCTTATTAAAGCTATAGATAACTTTGATTTAAGCCACAATGTTAGAT
TCTCAACATATGCAGTACCT

Downstream 100 bases:

>100_bases
TATTTATAGTAAAGAAAGATTGAGAAACAAAATTTAAATTAATGTTTTTCAATCTTTTACTGGTTTTAAGTATAAATCTT
TATAAAATTTATATAAATAT

Product: RNA polymerase sigma-G factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MIIGEIRRYLRDNNSIRVSRSLRDIAYKALQVRDKLIAKNDKEPTVSEIAKELDIPREDVVFALDAIQDPLSLFEPIYQD
GGDSIYVMDQISDTKNLDDSWIENIAIKEAMRNLNKREKLILSLRFFDGRTQMEVADEIGISQAQVSRLEKTALKHMRKF
V

Sequences:

>Translated_161_residues
MIIGEIRRYLRDNNSIRVSRSLRDIAYKALQVRDKLIAKNDKEPTVSEIAKELDIPREDVVFALDAIQDPLSLFEPIYQD
GGDSIYVMDQISDTKNLDDSWIENIAIKEAMRNLNKREKLILSLRFFDGRTQMEVADEIGISQAQVSRLEKTALKHMRKF
V
>Mature_161_residues
MIIGEIRRYLRDNNSIRVSRSLRDIAYKALQVRDKLIAKNDKEPTVSEIAKELDIPREDVVFALDAIQDPLSLFEPIYQD
GGDSIYVMDQISDTKNLDDSWIENIAIKEAMRNLNKREKLILSLRFFDGRTQMEVADEIGISQAQVSRLEKTALKHMRKF
V

Specific function: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is responsible for the expression of sporulation specific genes [H]

COG id: COG1191

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma-70 factor family [H]

Homologues:

None

Paralogues:

None

Copy number: <10 [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014284
- InterPro:   IPR014322
- InterPro:   IPR014212
- InterPro:   IPR000943
- InterPro:   IPR007627
- InterPro:   IPR007624
- InterPro:   IPR007630
- InterPro:   IPR013325
- InterPro:   IPR013324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04542 Sigma70_r2; PF04539 Sigma70_r3; PF04545 Sigma70_r4 [H]

EC number: NA

Molecular weight: Translated: 18642; Mature: 18642

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS00716 SIGMA70_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIGEIRRYLRDNNSIRVSRSLRDIAYKALQVRDKLIAKNDKEPTVSEIAKELDIPREDV
CCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHH
VFALDAIQDPLSLFEPIYQDGGDSIYVMDQISDTKNLDDSWIENIAIKEAMRNLNKREKL
HHHHHHHHCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ILSLRFFDGRTQMEVADEIGISQAQVSRLEKTALKHMRKFV
HHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIIGEIRRYLRDNNSIRVSRSLRDIAYKALQVRDKLIAKNDKEPTVSEIAKELDIPREDV
CCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHH
VFALDAIQDPLSLFEPIYQDGGDSIYVMDQISDTKNLDDSWIENIAIKEAMRNLNKREKL
HHHHHHHHCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ILSLRFFDGRTQMEVADEIGISQAQVSRLEKTALKHMRKFV
HHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7961408; 7883192; 11466286 [H]