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The map label for this gene is spoIIGA [H]

Identifier: 28210820

GI number: 28210820

Start: 1191335

End: 1192138

Strand: Direct

Name: spoIIGA [H]

Synonym: CTC01125

Alternate gene names: 28210820

Gene position: 1191335-1192138 (Clockwise)

Preceding gene: 28210819

Following gene: 161486847

Centisome position: 42.56

GC content: 25.12

Gene sequence:

>804_bases
ATGCATATATACCTTGATATTTTATTTCTTGAAAACTTTATAATAAATAGGTTTCTTCTTTCTTTAACAGCAAAGACTGT
TAAGGAAAAGGTAAATTCTATTTTTTTAAGTTTAGCTTCAATAATAGGTAGTTCATATCTTTTATTTATATTAATAGGGA
AAAAAACTTATGCAAATAATATTTTTTTCAAACTTTTAGTTGCTTTTTGCATGGTATTTACAATTTTTAGAAAGAAGAAT
ATAATTTTTAAATTAAAAACTACTTTTATATTCATCTTATATTCAATATTATTGGCAGGAATATGTATTTTTATGCAAAT
CGCTAATGGCAATGGACTTAAAAGCAATGTAGCAATTGTAAATTTTCCATATAAAAAACTTTTAATGGCGATAATACTAC
TGTATTTACTATTAGAGAGAATAGTTAGCTTTATAAGGGATAGAATTGTTTTAGACAAGCTTATATATAAAATAGATATA
GATCTAAAGAACTCCAAAAAAAGTATAAATGCATTTTTGGATACAGGAAACGAATTAGTTGAGCCAGTGACTAATTTGCC
AGTTATCGTTGTAGAAAAAGACATATTTCAAAAAAATGAAATAGAAGATTATGATACTGTATACATTCCTTTTTCAGTAG
TTAATGGAGATAGAGGAATGCTTAAGGCAATAAAGCCTGAGATGGTATCAATATATAAAAAAAGAGAAATAGAAAAAAAA
GAAGTGTTAATAGCTTTTTCAGATAAGAAATTAAGTTCTTCTGGAGACTATAGAGCATTATTATCAAGGGGCATTATTTT
CTAG

Upstream 100 bases:

>100_bases
TTATTATCAAAATAAGGGGAATAAAAAGAAGGAATACATACCAAAAAATAACAAAATTTTAAAATATTAAGATATATAAT
AATAAACAGGAGGGATTTTA

Downstream 100 bases:

>100_bases
TGAGCAACTAACAATGAACAATGGTGAATATCTAGGTTTTATATAATTAAAAACTTTTCGTAATATCAATGGAAAAAACT
ATTAATAATTGTTCATTATT

Product: putative sporulation sigma-E factor processing peptidase

Products: NA

Alternate protein names: Stage II sporulation protein GA [H]

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MHIYLDILFLENFIINRFLLSLTAKTVKEKVNSIFLSLASIIGSSYLLFILIGKKTYANNIFFKLLVAFCMVFTIFRKKN
IIFKLKTTFIFILYSILLAGICIFMQIANGNGLKSNVAIVNFPYKKLLMAIILLYLLLERIVSFIRDRIVLDKLIYKIDI
DLKNSKKSINAFLDTGNELVEPVTNLPVIVVEKDIFQKNEIEDYDTVYIPFSVVNGDRGMLKAIKPEMVSIYKKREIEKK
EVLIAFSDKKLSSSGDYRALLSRGIIF

Sequences:

>Translated_267_residues
MHIYLDILFLENFIINRFLLSLTAKTVKEKVNSIFLSLASIIGSSYLLFILIGKKTYANNIFFKLLVAFCMVFTIFRKKN
IIFKLKTTFIFILYSILLAGICIFMQIANGNGLKSNVAIVNFPYKKLLMAIILLYLLLERIVSFIRDRIVLDKLIYKIDI
DLKNSKKSINAFLDTGNELVEPVTNLPVIVVEKDIFQKNEIEDYDTVYIPFSVVNGDRGMLKAIKPEMVSIYKKREIEKK
EVLIAFSDKKLSSSGDYRALLSRGIIF
>Mature_267_residues
MHIYLDILFLENFIINRFLLSLTAKTVKEKVNSIFLSLASIIGSSYLLFILIGKKTYANNIFFKLLVAFCMVFTIFRKKN
IIFKLKTTFIFILYSILLAGICIFMQIANGNGLKSNVAIVNFPYKKLLMAIILLYLLLERIVSFIRDRIVLDKLIYKIDI
DLKNSKKSINAFLDTGNELVEPVTNLPVIVVEKDIFQKNEIEDYDTVYIPFSVVNGDRGMLKAIKPEMVSIYKKREIEKK
EVLIAFSDKKLSSSGDYRALLSRGIIF

Specific function: Probably activates RNA polymerase sigma-E factor at the stage II of sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005081 [H]

Pfam domain/function: PF03419 Peptidase_U4 [H]

EC number: NA

Molecular weight: Translated: 30699; Mature: 30699

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIYLDILFLENFIINRFLLSLTAKTVKEKVNSIFLSLASIIGSSYLLFILIGKKTYANN
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHH
IFFKLLVAFCMVFTIFRKKNIIFKLKTTFIFILYSILLAGICIFMQIANGNGLKSNVAIV
HHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
NFPYKKLLMAIILLYLLLERIVSFIRDRIVLDKLIYKIDIDLKNSKKSINAFLDTGNELV
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHCCHHHH
EPVTNLPVIVVEKDIFQKNEIEDYDTVYIPFSVVNGDRGMLKAIKPEMVSIYKKREIEKK
HHHHCCCEEEEEHHHHCCCCCCCCCEEEEEEEEECCCCHHHHHHCHHHHHHHHHHCCCCH
EVLIAFSDKKLSSSGDYRALLSRGIIF
HEEEEEECCCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MHIYLDILFLENFIINRFLLSLTAKTVKEKVNSIFLSLASIIGSSYLLFILIGKKTYANN
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHH
IFFKLLVAFCMVFTIFRKKNIIFKLKTTFIFILYSILLAGICIFMQIANGNGLKSNVAIV
HHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
NFPYKKLLMAIILLYLLLERIVSFIRDRIVLDKLIYKIDIDLKNSKKSINAFLDTGNELV
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHCCHHHH
EPVTNLPVIVVEKDIFQKNEIEDYDTVYIPFSVVNGDRGMLKAIKPEMVSIYKKREIEKK
HHHHCCCEEEEEHHHHCCCCCCCCCEEEEEEEEECCCCHHHHHHCHHHHHHHHHHCCCCH
EVLIAFSDKKLSSSGDYRALLSRGIIF
HEEEEEECCCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7961408; 7883192; 11466286 [H]