| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210799
Identifier: 28210799
GI number: 28210799
Start: 1165343
End: 1165669
Strand: Direct
Name: 28210799
Synonym: CTC01098
Alternate gene names: NA
Gene position: 1165343-1165669 (Clockwise)
Preceding gene: 28210798
Following gene: 28210800
Centisome position: 41.63
GC content: 22.63
Gene sequence:
>327_bases ATGGCAACTTTTAAAAATCCAGTAGTAACTTGTGATAAATGCGGAAAAGATTTTAAATTAAAACAAAATAGATTAAAGAG TGAGATAGTAAAAGAAAATATAGAAAGAACTTATTTTAAGTGTCCAAAATGTAAGCATAAATTTATAGTTATGTATAAAG ATCAAGAGATTAAAGAAAATCTAAAGAAAATGGACAACATAAAAGTGCAGATACAAAAATCAATAAATGAAAAGAAAAAT ACAAAAAAGTTAATAGGGAGATATGAAGAGTTATATTATAACAATTTAGAAATAAGTGAGAAATACAAAAGTTTATATGG AAGATAA
Upstream 100 bases:
>100_bases CACAGAACCTAAATTCGAAGATAATAAGAACGTAAACAAACAAAACAATAGTGATGTAATAGATTGGTTGAATTCCAATA ATAAATAGGGGGAATTAATT
Downstream 100 bases:
>100_bases AACTTAAAGGCATAGAAATATGTCTTTTTTATTCCCTAAAATGGGAGGTGAGAACACATGGCAATAAACGTAGGTACAGC TGTTGCTTACCTTACACTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MATFKNPVVTCDKCGKDFKLKQNRLKSEIVKENIERTYFKCPKCKHKFIVMYKDQEIKENLKKMDNIKVQIQKSINEKKN TKKLIGRYEELYYNNLEISEKYKSLYGR
Sequences:
>Translated_108_residues MATFKNPVVTCDKCGKDFKLKQNRLKSEIVKENIERTYFKCPKCKHKFIVMYKDQEIKENLKKMDNIKVQIQKSINEKKN TKKLIGRYEELYYNNLEISEKYKSLYGR >Mature_107_residues ATFKNPVVTCDKCGKDFKLKQNRLKSEIVKENIERTYFKCPKCKHKFIVMYKDQEIKENLKKMDNIKVQIQKSINEKKNT KKLIGRYEELYYNNLEISEKYKSLYGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13052; Mature: 12920
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATFKNPVVTCDKCGKDFKLKQNRLKSEIVKENIERTYFKCPKCKHKFIVMYKDQEIKEN CCCCCCCCEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHH LKKMDNIKVQIQKSINEKKNTKKLIGRYEELYYNNLEISEKYKSLYGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure ATFKNPVVTCDKCGKDFKLKQNRLKSEIVKENIERTYFKCPKCKHKFIVMYKDQEIKEN CCCCCCCEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHH LKKMDNIKVQIQKSINEKKNTKKLIGRYEELYYNNLEISEKYKSLYGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA