Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210778

Identifier: 28210778

GI number: 28210778

Start: 1146049

End: 1146927

Strand: Direct

Name: 28210778

Synonym: CTC01077

Alternate gene names: NA

Gene position: 1146049-1146927 (Clockwise)

Preceding gene: 28210777

Following gene: 28210779

Centisome position: 40.94

GC content: 30.6

Gene sequence:

>879_bases
ATGGCGGAAGGAAAGGAAAAAGGATGGATAAGTTTATACAGGGATATTCAAGAGCATTGGATATGGGAAGATGCAGAAAA
GTTAAAAGCATGGCTGGATCTTCTCCTTCTTGCCAATCATCAGAGTAGAAAAATTTTATTAGGAAATGAACTTATAGAGA
TAAAAAGAGGTTCTACACATGCATCAGAATTAAAGCTTATGGATAGATGGAATTGGTCTAAGAAAAAGGTTAGAAACTTT
CTTCAACTACTAGAAAAAGATAATATGATAATTTGTGAAAAATCTAAAAAGGGAACCACTATAACAATAATAAACTACGA
GGTTTATCAAGGTTCAAGGAACCATAGAGAAACCATAAAAGAACCACAGGGGAACCATAAGGAAACCATAAAGGAACTAT
TAGGAGACCATAAGGGATACACTAACAATAATGATAATAATTATAATAATATAAATAATGATAATAACAGTAGTGGCAGC
ACTCCAAATTATATAGAATTTTTTAATAGTAATTTTCATCTGATAAATTCTTATGAAATAAATATATTAAATAGTTTTGT
AAAAGATGGATTAAGTGAGGAAGTAATATTATTAGCTTTAAAAAAAGCAGTAGAAAATAATGTTAGGACTATAAAGTATG
TTAAAAGCATATTGCAAAACTGGTTAGAAAACAATATTAAAACTGTTGAAGGAGTAAAAGCAGAGGAGGAAAGATTCAAG
AGGGACATTGAACATAAAAAAGCAAAGGGCAATGTAGAAAGAAAAGACAATGGAGCTAAAGTAGACAGTTTTAACGGCTA
TCAGCAAAGAACATACGACGGCAGTGATGGTGGAATGACATTTGATGATTTAGAAAAGAAACTTTTAGGTTGGAAATAA

Upstream 100 bases:

>100_bases
AAGGAGAAGAATACTACGATATTGATGGAACTATACTTTGTGAAGAATGTATTAGAGATTACAAGCATACAGCAGAACTC
TAATAACTAAGGAGGAAACT

Downstream 100 bases:

>100_bases
GGAGGGAAAACAATGCGAAAGATATGGAGAAATGCTGAATTGGACTTTATAAGGAAAAATAAAGGAAAATTAAGTTACAA
AGAAATGTCTAAACATCTAA

Product: phage protein

Products: NA

Alternate protein names: Phage Replication Protein; Replication Protein O; Phage Regulatory Protein; DNAD Domain Containing Protein; DNAD Domain-Containing Protein

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MAEGKEKGWISLYRDIQEHWIWEDAEKLKAWLDLLLLANHQSRKILLGNELIEIKRGSTHASELKLMDRWNWSKKKVRNF
LQLLEKDNMIICEKSKKGTTITIINYEVYQGSRNHRETIKEPQGNHKETIKELLGDHKGYTNNNDNNYNNINNDNNSSGS
TPNYIEFFNSNFHLINSYEINILNSFVKDGLSEEVILLALKKAVENNVRTIKYVKSILQNWLENNIKTVEGVKAEEERFK
RDIEHKKAKGNVERKDNGAKVDSFNGYQQRTYDGSDGGMTFDDLEKKLLGWK

Sequences:

>Translated_292_residues
MAEGKEKGWISLYRDIQEHWIWEDAEKLKAWLDLLLLANHQSRKILLGNELIEIKRGSTHASELKLMDRWNWSKKKVRNF
LQLLEKDNMIICEKSKKGTTITIINYEVYQGSRNHRETIKEPQGNHKETIKELLGDHKGYTNNNDNNYNNINNDNNSSGS
TPNYIEFFNSNFHLINSYEINILNSFVKDGLSEEVILLALKKAVENNVRTIKYVKSILQNWLENNIKTVEGVKAEEERFK
RDIEHKKAKGNVERKDNGAKVDSFNGYQQRTYDGSDGGMTFDDLEKKLLGWK
>Mature_291_residues
AEGKEKGWISLYRDIQEHWIWEDAEKLKAWLDLLLLANHQSRKILLGNELIEIKRGSTHASELKLMDRWNWSKKKVRNFL
QLLEKDNMIICEKSKKGTTITIINYEVYQGSRNHRETIKEPQGNHKETIKELLGDHKGYTNNNDNNYNNINNDNNSSGST
PNYIEFFNSNFHLINSYEINILNSFVKDGLSEEVILLALKKAVENNVRTIKYVKSILQNWLENNIKTVEGVKAEEERFKR
DIEHKKAKGNVERKDNGAKVDSFNGYQQRTYDGSDGGMTFDDLEKKLLGWK

Specific function: Unknown

COG id: COG3935

COG function: function code L; Putative primosome component and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34066; Mature: 33935

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEGKEKGWISLYRDIQEHWIWEDAEKLKAWLDLLLLANHQSRKILLGNELIEIKRGSTH
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCEEEECCCCCH
ASELKLMDRWNWSKKKVRNFLQLLEKDNMIICEKSKKGTTITIINYEVYQGSRNHRETIK
HHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEEECCCCCHHHHHC
EPQGNHKETIKELLGDHKGYTNNNDNNYNNINNDNNSSGSTPNYIEFFNSNFHLINSYEI
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCEEEEEEEHH
NILNSFVKDGLSEEVILLALKKAVENNVRTIKYVKSILQNWLENNIKTVEGVKAEEERFK
HHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHH
RDIEHKKAKGNVERKDNGAKVDSFNGYQQRTYDGSDGGMTFDDLEKKLLGWK
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
AEGKEKGWISLYRDIQEHWIWEDAEKLKAWLDLLLLANHQSRKILLGNELIEIKRGSTH
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCEEEECCCCCH
ASELKLMDRWNWSKKKVRNFLQLLEKDNMIICEKSKKGTTITIINYEVYQGSRNHRETIK
HHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEEECCCCCHHHHHC
EPQGNHKETIKELLGDHKGYTNNNDNNYNNINNDNNSSGSTPNYIEFFNSNFHLINSYEI
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCEEEEEEEHH
NILNSFVKDGLSEEVILLALKKAVENNVRTIKYVKSILQNWLENNIKTVEGVKAEEERFK
HHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHH
RDIEHKKAKGNVERKDNGAKVDSFNGYQQRTYDGSDGGMTFDDLEKKLLGWK
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA