Click here to switch to the map view.

The map label for this gene is yrrI [H]

Identifier: 28210756

GI number: 28210756

Start: 1122483

End: 1123496

Strand: Direct

Name: yrrI [H]

Synonym: CTC01054

Alternate gene names: 28210756

Gene position: 1122483-1123496 (Clockwise)

Preceding gene: 28210755

Following gene: 28210757

Centisome position: 40.1

GC content: 23.57

Gene sequence:

>1014_bases
ATGGATAAAATTTATAAGAAAATAATATTGTATGTTCTAATAGGTTTAGTAATAGCTATTATATTTAGTAATAGTACTTT
TAGAAATATATTAAAATTAATTGTTATATCTTTTGTTATTGCGTATATATTAAAACCTGTAAAGGAAGTATTAGTAAAAG
TAGGTATAAAAGATGGTATAGCATCCTTTATAACCATATTTTCTCTAATTATTCTGGTGGTAATATTTGTAATGTTTTTA
ATACCTTCTCTGTTTAGAGAAAGTAATAATATAATAGTTGCATTAGATAGGATACAAATGTTTTTAGATGGTGCTTATGA
CAAGATAAAACCTTTAAAAAATAATAAAATGGGTATAGAACTTTTACATCATATATATAGTAAGGTAGATACAATAATTA
ATAAAACATTTATGAATATTTTTGACAAAACCGTTAGTTTAGGAGAAAATATTATGGATATTTTTATAATACCAATAATA
TCTTATTACTTTCTAGTAGATTGGAAAAAAATAAATAGTAGACTTATTGTTTTATTTCCCATGAAAATAAGAACTGTAGT
ACAAAGAATAATGAAAGATATTGATAAAATTTTAACTAGATATATAGTGGTGCAAATCATACTTAGTGCTCTTATAGGTG
CAGTTACATTTATAATTTTAATATTGTTAAAAGTTGATTTTCCAATTTTACTATCTGTAATTAATGCTTTTTTTAATATT
ATACCTTATTTTGGACCAATACTTGGCTCAATTCCTGCAATACTTGTAGCTCTCACTATATCTACAAAAAAAGCTCTATG
GACAGCGATATGTCTATATTTAATACAACAAATAGAGGGAAATATCATTTCTCCTAAATTTATTGGAGATAATATAAGTA
TGCACCCACTTTTAATAATTATTTTACTTATAATAGGAGGAGAATTGTGGGGAGTTTTAGGTATGATACTAGCTATTCCT
CTAGGAGTTATTATAAAAGTTATATATGAAGATTTAAACTATTATATATTCTAA

Upstream 100 bases:

>100_bases
GACTTAATAGTATCAGAGGAAAATATTATTTATAAAAATAGAAAAGATAAAATTAATTTTGTAAATTTACCTAATAATAT
AATAAAAAAGGAAAATATAG

Downstream 100 bases:

>100_bases
TTTTTTCACTTAAATTTAATGAAATTATTGACATATTATGATTTTTTATTTATAATCGTTATCAAAATGAATAATTATGA
CAATGATAAAAAGGAGTAAA

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MDKIYKKIILYVLIGLVIAIIFSNSTFRNILKLIVISFVIAYILKPVKEVLVKVGIKDGIASFITIFSLIILVVIFVMFL
IPSLFRESNNIIVALDRIQMFLDGAYDKIKPLKNNKMGIELLHHIYSKVDTIINKTFMNIFDKTVSLGENIMDIFIIPII
SYYFLVDWKKINSRLIVLFPMKIRTVVQRIMKDIDKILTRYIVVQIILSALIGAVTFIILILLKVDFPILLSVINAFFNI
IPYFGPILGSIPAILVALTISTKKALWTAICLYLIQQIEGNIISPKFIGDNISMHPLLIIILLIIGGELWGVLGMILAIP
LGVIIKVIYEDLNYYIF

Sequences:

>Translated_337_residues
MDKIYKKIILYVLIGLVIAIIFSNSTFRNILKLIVISFVIAYILKPVKEVLVKVGIKDGIASFITIFSLIILVVIFVMFL
IPSLFRESNNIIVALDRIQMFLDGAYDKIKPLKNNKMGIELLHHIYSKVDTIINKTFMNIFDKTVSLGENIMDIFIIPII
SYYFLVDWKKINSRLIVLFPMKIRTVVQRIMKDIDKILTRYIVVQIILSALIGAVTFIILILLKVDFPILLSVINAFFNI
IPYFGPILGSIPAILVALTISTKKALWTAICLYLIQQIEGNIISPKFIGDNISMHPLLIIILLIIGGELWGVLGMILAIP
LGVIIKVIYEDLNYYIF
>Mature_337_residues
MDKIYKKIILYVLIGLVIAIIFSNSTFRNILKLIVISFVIAYILKPVKEVLVKVGIKDGIASFITIFSLIILVVIFVMFL
IPSLFRESNNIIVALDRIQMFLDGAYDKIKPLKNNKMGIELLHHIYSKVDTIINKTFMNIFDKTVSLGENIMDIFIIPII
SYYFLVDWKKINSRLIVLFPMKIRTVVQRIMKDIDKILTRYIVVQIILSALIGAVTFIILILLKVDFPILLSVINAFFNI
IPYFGPILGSIPAILVALTISTKKALWTAICLYLIQQIEGNIISPKFIGDNISMHPLLIIILLIIGGELWGVLGMILAIP
LGVIIKVIYEDLNYYIF

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=308, Percent_Identity=22.0779220779221, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1787885, Length=161, Percent_Identity=29.1925465838509, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38292; Mature: 38292

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKIYKKIILYVLIGLVIAIIFSNSTFRNILKLIVISFVIAYILKPVKEVLVKVGIKDGI
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASFITIFSLIILVVIFVMFLIPSLFRESNNIIVALDRIQMFLDGAYDKIKPLKNNKMGIE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCHHHCCCCCCCCHHHH
LLHHIYSKVDTIINKTFMNIFDKTVSLGENIMDIFIIPIISYYFLVDWKKINSRLIVLFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
MKIRTVVQRIMKDIDKILTRYIVVQIILSALIGAVTFIILILLKVDFPILLSVINAFFNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
IPYFGPILGSIPAILVALTISTKKALWTAICLYLIQQIEGNIISPKFIGDNISMHPLLII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
ILLIIGGELWGVLGMILAIPLGVIIKVIYEDLNYYIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDKIYKKIILYVLIGLVIAIIFSNSTFRNILKLIVISFVIAYILKPVKEVLVKVGIKDGI
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASFITIFSLIILVVIFVMFLIPSLFRESNNIIVALDRIQMFLDGAYDKIKPLKNNKMGIE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCHHHCCCCCCCCHHHH
LLHHIYSKVDTIINKTFMNIFDKTVSLGENIMDIFIIPIISYYFLVDWKKINSRLIVLFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
MKIRTVVQRIMKDIDKILTRYIVVQIILSALIGAVTFIILILLKVDFPILLSVINAFFNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
IPYFGPILGSIPAILVALTISTKKALWTAICLYLIQQIEGNIISPKFIGDNISMHPLLII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
ILLIIGGELWGVLGMILAIPLGVIIKVIYEDLNYYIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]