Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210755

Identifier: 28210755

GI number: 28210755

Start: 1121993

End: 1122490

Strand: Direct

Name: 28210755

Synonym: CTC01053

Alternate gene names: NA

Gene position: 1121993-1122490 (Clockwise)

Preceding gene: 28210754

Following gene: 28210756

Centisome position: 40.08

GC content: 22.09

Gene sequence:

>498_bases
GTGTATAGAAAAAAAGACTTTTTACTTATGGAAGTATATAATGAAAAAGATAAAAGAATAGGTTTTATAAAGGATATGAT
TATTCAGCTAGAAGAAGAAGAAATACTAGGTTTTGTAATTATATCCTATAATTTATTTAAGGGATATTCTCATATATTAA
AAGAAGATATAATATCTTTTAAAGAAAATATGAGAGTTAGAAAAGAAAGCAAGGGTGAAGAAATACACTTTAACAGTATT
AAATCAAAACATGTTATAGATGAAGAGGAAAATATTTTAGGGTTTATAGAGGATATAGTATTTACAGAAGATTTTAAAAT
TAATGGTGTAATAATTTCAACGGGCTATATTTCAAATTTTTTATATGGTAAGAAGGTTGTACTACCAAAGGACTTAATAG
TATCAGAGGAAAATATTATTTATAAAAATAGAAAAGATAAAATTAATTTTGTAAATTTACCTAATAATATAATAAAAAAG
GAAAATATAGATGGATAA

Upstream 100 bases:

>100_bases
TAATAGAATCAGTTGAAAGCTCTACTTAATTTAAAAGTAGAGTATATTTTTTGTTTCGTAAGTAAAAAATATATAAAAGC
ATATATTTGAAGGTGATTTT

Downstream 100 bases:

>100_bases
AATTTATAAGAAAATAATATTGTATGTTCTAATAGGTTTAGTAATAGCTATTATATTTAGTAATAGTACTTTTAGAAATA
TATTAAAATTAATTGTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: PRC-Barrel Domain Protein

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MYRKKDFLLMEVYNEKDKRIGFIKDMIIQLEEEEILGFVIISYNLFKGYSHILKEDIISFKENMRVRKESKGEEIHFNSI
KSKHVIDEEENILGFIEDIVFTEDFKINGVIISTGYISNFLYGKKVVLPKDLIVSEENIIYKNRKDKINFVNLPNNIIKK
ENIDG

Sequences:

>Translated_165_residues
MYRKKDFLLMEVYNEKDKRIGFIKDMIIQLEEEEILGFVIISYNLFKGYSHILKEDIISFKENMRVRKESKGEEIHFNSI
KSKHVIDEEENILGFIEDIVFTEDFKINGVIISTGYISNFLYGKKVVLPKDLIVSEENIIYKNRKDKINFVNLPNNIIKK
ENIDG
>Mature_165_residues
MYRKKDFLLMEVYNEKDKRIGFIKDMIIQLEEEEILGFVIISYNLFKGYSHILKEDIISFKENMRVRKESKGEEIHFNSI
KSKHVIDEEENILGFIEDIVFTEDFKINGVIISTGYISNFLYGKKVVLPKDLIVSEENIIYKNRKDKINFVNLPNNIIKK
ENIDG

Specific function: Unknown

COG id: COG3881

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19503; Mature: 19503

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRKKDFLLMEVYNEKDKRIGFIKDMIIQLEEEEILGFVIISYNLFKGYSHILKEDIISF
CCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHH
KENMRVRKESKGEEIHFNSIKSKHVIDEEENILGFIEDIVFTEDFKINGVIISTGYISNF
HHCCHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCHHHHH
LYGKKVVLPKDLIVSEENIIYKNRKDKINFVNLPNNIIKKENIDG
HCCCEEECCHHHEECCCCEEEECCCCCEEEEECCHHHHCCCCCCC
>Mature Secondary Structure
MYRKKDFLLMEVYNEKDKRIGFIKDMIIQLEEEEILGFVIISYNLFKGYSHILKEDIISF
CCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHH
KENMRVRKESKGEEIHFNSIKSKHVIDEEENILGFIEDIVFTEDFKINGVIISTGYISNF
HHCCHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCHHHHH
LYGKKVVLPKDLIVSEENIIYKNRKDKINFVNLPNNIIKKENIDG
HCCCEEECCHHHEECCCCEEEECCCCCEEEEECCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA