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The map label for this gene is rnfG [H]

Identifier: 28210726

GI number: 28210726

Start: 1090189

End: 1090758

Strand: Direct

Name: rnfG [H]

Synonym: CTC01021

Alternate gene names: 28210726

Gene position: 1090189-1090758 (Clockwise)

Preceding gene: 28210725

Following gene: 28210727

Centisome position: 38.95

GC content: 32.81

Gene sequence:

>570_bases
ATGAAGAAAAATGGTATTTTAAAATTAGGTATTGTTTTATTAATTATAGCAGGTGTCTGTGGATTAATACTTGGTGGTAT
TAATCAAGTAACAGCAGAGCCTATAGCTATTCAAGCTAAGAAAACTATAGACGAAGCAAATAAAGAAATACTTCCAGTAG
CATCTACTTTTGAAGAGAAGAAGGATGTAGAATTAGATGAAGGAATATTATCTTTATCAGAAGGTAAAGAAGGTTCTGAA
GTTAAGGGATATACTATAAAAGTTGCACCTAAAGGATATGGTGGTGCTATTGAAATGATGGTTGGTATATCAACAGAGGG
GAAAATTACTGGTATAAAGGTTTTAAATCATTCAGAAACACCAGGACTTGGAGCTCATGCTGATAGCCCAGATTTTTCAG
ATCAATATAAGGATAAGCCAACTGAAAAACTTTCAGTAGTTAAAGGAACTGCATCAAAGGATACTGAAATAGCAGCTATA
ACAGGTGCTACAATAACAAGTAATGCAGTAACAGATGGGGTTAATAAAGCAATAGAATTTTATAACTCCAAATTGAAAGG
AGGAAATTAA

Upstream 100 bases:

>100_bases
TATCCAGAAGGAGTATCTTACTCTATACTTATTATGAACTTATTTGTTCCACTTATAGAAAGATGGACAACACCTAGAAC
ATTTGGGAAGGTGAAGTAAT

Downstream 100 bases:

>100_bases
TAATGTCAATGGGTGATAGATTATACAATGGTATTATTAGAGAAAATCCAACTTTTGTTCAGGTATTAGGAATGTGTCCA
ACCCTAGCGGTAACTTCAAG

Product: rnfG/nqrC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKKNGILKLGIVLLIIAGVCGLILGGINQVTAEPIAIQAKKTIDEANKEILPVASTFEEKKDVELDEGILSLSEGKEGSE
VKGYTIKVAPKGYGGAIEMMVGISTEGKITGIKVLNHSETPGLGAHADSPDFSDQYKDKPTEKLSVVKGTASKDTEIAAI
TGATITSNAVTDGVNKAIEFYNSKLKGGN

Sequences:

>Translated_189_residues
MKKNGILKLGIVLLIIAGVCGLILGGINQVTAEPIAIQAKKTIDEANKEILPVASTFEEKKDVELDEGILSLSEGKEGSE
VKGYTIKVAPKGYGGAIEMMVGISTEGKITGIKVLNHSETPGLGAHADSPDFSDQYKDKPTEKLSVVKGTASKDTEIAAI
TGATITSNAVTDGVNKAIEFYNSKLKGGN
>Mature_189_residues
MKKNGILKLGIVLLIIAGVCGLILGGINQVTAEPIAIQAKKTIDEANKEILPVASTFEEKKDVELDEGILSLSEGKEGSE
VKGYTIKVAPKGYGGAIEMMVGISTEGKITGIKVLNHSETPGLGAHADSPDFSDQYKDKPTEKLSVVKGTASKDTEIAAI
TGATITSNAVTDGVNKAIEFYNSKLKGGN

Specific function: May be part of a membrane complex involved in electron transport [H]

COG id: COG4659

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfG

Gene ontology:

Cell location: Cell inner membrane (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rnfG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022989
- InterPro:   IPR010209
- InterPro:   IPR007329 [H]

Pfam domain/function: PF04205 FMN_bind [H]

EC number: NA

Molecular weight: Translated: 19731; Mature: 19731

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNGILKLGIVLLIIAGVCGLILGGINQVTAEPIAIQAKKTIDEANKEILPVASTFEEK
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEHHHHHHHCCCCEECCHHHHHHH
KDVELDEGILSLSEGKEGSEVKGYTIKVAPKGYGGAIEMMVGISTEGKITGIKVLNHSET
CCCCHHHHHEECCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCEEEEEEEECCCC
PGLGAHADSPDFSDQYKDKPTEKLSVVKGTASKDTEIAAITGATITSNAVTDGVNKAIEF
CCCCCCCCCCCCCCHHCCCCCHHEEEEECCCCCCCEEEEEECCEEECCHHHHHHHHHHHH
YNSKLKGGN
HHHHCCCCC
>Mature Secondary Structure
MKKNGILKLGIVLLIIAGVCGLILGGINQVTAEPIAIQAKKTIDEANKEILPVASTFEEK
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEHHHHHHHCCCCEECCHHHHHHH
KDVELDEGILSLSEGKEGSEVKGYTIKVAPKGYGGAIEMMVGISTEGKITGIKVLNHSET
CCCCHHHHHEECCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCEEEEEEEECCCC
PGLGAHADSPDFSDQYKDKPTEKLSVVKGTASKDTEIAAITGATITSNAVTDGVNKAIEF
CCCCCCCCCCCCCCHHCCCCCHHEEEEECCCCCCCEEEEEECCEEECCHHHHHHHHHHHH
YNSKLKGGN
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA