Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210708

Identifier: 28210708

GI number: 28210708

Start: 1073192

End: 1073596

Strand: Direct

Name: 28210708

Synonym: CTC01002

Alternate gene names: NA

Gene position: 1073192-1073596 (Clockwise)

Preceding gene: 28210707

Following gene: 28210709

Centisome position: 38.34

GC content: 28.4

Gene sequence:

>405_bases
ATGAAAGAGAATAGAATAAAAGCTTGTATGATAGGGGAAAGCATATTTAAAGTAGGTGATTATACTTCACTAGCACAAGG
GTGGGGAATATATAAAGGTGCAATATCTTTAGAAGAATGTGTTAACTTTAAAATAAAGGACATGTACTTTGAAGAGTTTG
AAGATGGACAACTACCAAGATTTATAGCAGTAGTAGAAACTAATAAAAATAAAACTGTAAATGTTAATATAGAAGATTTA
AAAGATATAAGATGTAATGTTGAAAATAGAAAAGAATTAGAGAGAATAGGTTATGATTTTCAAAAAGGAGCTATATATTG
TAAGGGATATGAAGATTTAAATGGACATTGGAAATTCTTTAACATAGGATTACAGGGACTAGAAAAAACCTTATGTATGG
CTTAG

Upstream 100 bases:

>100_bases
TTCAGAAAAATTTAAAAAAAACATATTGACAAAGTTTTAACAAGTATGATAAAATATAAACAAGTTAAAAGAGGATATAA
AAAAGAGGAGGGGTCTAGTT

Downstream 100 bases:

>100_bases
TATATGAAAATAAAGATATATATTTAAAATTTGGAATATTCATTAGGATGAATGATGTTCCAAATTTTATTTTTTGTTTA
CAAAAAGAATAAGTAGGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MKENRIKACMIGESIFKVGDYTSLAQGWGIYKGAISLEECVNFKIKDMYFEEFEDGQLPRFIAVVETNKNKTVNVNIEDL
KDIRCNVENRKELERIGYDFQKGAIYCKGYEDLNGHWKFFNIGLQGLEKTLCMA

Sequences:

>Translated_134_residues
MKENRIKACMIGESIFKVGDYTSLAQGWGIYKGAISLEECVNFKIKDMYFEEFEDGQLPRFIAVVETNKNKTVNVNIEDL
KDIRCNVENRKELERIGYDFQKGAIYCKGYEDLNGHWKFFNIGLQGLEKTLCMA
>Mature_134_residues
MKENRIKACMIGESIFKVGDYTSLAQGWGIYKGAISLEECVNFKIKDMYFEEFEDGQLPRFIAVVETNKNKTVNVNIEDL
KDIRCNVENRKELERIGYDFQKGAIYCKGYEDLNGHWKFFNIGLQGLEKTLCMA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15511; Mature: 15511

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKENRIKACMIGESIFKVGDYTSLAQGWGIYKGAISLEECVNFKIKDMYFEEFEDGQLPR
CCCCCEEEEEECHHHHHCCCCHHHHHCCCEEECCEEHHHHCCCEEEEHHHHHCCCCCCCE
FIAVVETNKNKTVNVNIEDLKDIRCNVENRKELERIGYDFQKGAIYCKGYEDLNGHWKFF
EEEEEECCCCCEEEEEHHHCHHEECCCCCHHHHHHHCCCCCCCEEEEECCCCCCCEEEEE
NIGLQGLEKTLCMA
EECHHHHHHHHCCC
>Mature Secondary Structure
MKENRIKACMIGESIFKVGDYTSLAQGWGIYKGAISLEECVNFKIKDMYFEEFEDGQLPR
CCCCCEEEEEECHHHHHCCCCHHHHHCCCEEECCEEHHHHCCCEEEEHHHHHCCCCCCCE
FIAVVETNKNKTVNVNIEDLKDIRCNVENRKELERIGYDFQKGAIYCKGYEDLNGHWKFF
EEEEEECCCCCEEEEEHHHCHHEECCCCCHHHHHHHCCCCCCCEEEEECCCCCCCEEEEE
NIGLQGLEKTLCMA
EECHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA