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The map label for this gene is allC [C]

Identifier: 28210637

GI number: 28210637

Start: 984561

End: 985781

Strand: Direct

Name: allC [C]

Synonym: CTC00926

Alternate gene names: 28210637

Gene position: 984561-985781 (Clockwise)

Preceding gene: 28210636

Following gene: 28210638

Centisome position: 35.17

GC content: 29.57

Gene sequence:

>1221_bases
ATGATTTCAACAATAGAGGACATGCAATATTTAGAGGATATATTTAATAAATTTTATACAATTGGTTCAAATAATCAAGG
TGGAGTAACCAGATTAGGATATTCTGAAGAAGAGGATAAAATGCATAATATTTTTAAGCTTATTGGAGAAGAAGAGGGAT
TCCAAACTTATGAGGACGAAGTTGGTAATACTTATGTATTAAATAATCAAGAAAGTAATGAACATTATTTAATCGGTTCT
CACTTAGATTCTGTTATTAATGGTGGAAGATATGATGGTGTAGCAGGAGTAATAGCGGGACTTATGATTTTAAAATGGGC
AAAGAAAGATAAGCTTAACATACCAATTAAAGTAGTAGCTTTTAGATGCGAAGAATCTAGTAATTTTGGAATGTGTACCA
TAGGAAGTGGACTTATTACAAATGAAATTAGTAAGAATGATATTGAAAATTTAGTATCTAAAAAAGGAAAAACATTAAAA
GAAATATTTGGGAAAAAAGGGTATAGCTTAAATCCTAAAAAGATATCTAATATAAAGCAGTATTTAGAGCTTCACATTGA
ACAAGGAAAAGTACTTGAAGAATACAGGGTTAGAGTAGGAGTAGTATCTGATATAGCAGCACCAAGAAGATTTAATATAT
ATATACAAGGAGAGGCAGAACATTCTGGAGCAACACCTATGAATATGAGATATGATGCTTTATGTGCAGCTTCTGAAGTT
ATTTTATCAATAGAAAAAATAGGAAAAAAAGAAGCAATGAAAAAATCGGTTGCTACAGTTGGGGTTCTTAATAATTCACC
AAATGTTTTAAATGTTATACCAGGAGAAGTTAAATTAGGTGTAGACATAAGAGGCATAGATAAAAATAGTTTAAATAGTA
TGGAAGAAGAAATTAGAGAAGTTTCAGAAAACATATCTAAAAAAAGAAATGTAGAAATTTTTATTGAAAAGACAAGTGAA
TTACTTCCAGTAAAAATGAGTCAATACATGCAAGAAAGATTGGCTGAATGTTGTAAAAAAACAAAAATATCATATAAGAT
ACTTCCAAGTGGAGCAGGTCATGATGCTATGGTTTTCCCAAAAATATGTGATACAGCTCTAATATTTATACCTTGTTCTA
AGGGCATAAGTCATAATAAAAATGAGTTCACGTCTTTAGAGAGCATTCTTGATGGAACCAAAGTTATGTATGAATATTTG
AAGGGAGAAATATATAAATGA

Upstream 100 bases:

>100_bases
AAAATGAGTGAATATTTAATTAATAGAACATAGAAAACAGGTATTTACATTGTTAAAATGTAGATAATATGAGATTAATA
GATAAAGGTGAGGTTATAAA

Downstream 100 bases:

>100_bases
TACTTATTAAAGATGGTAGATTAATAGATCCTAAAACTAATAAAGATGAAATTTTAGATTTAATTATTAAAGATAATAAA
ATTTATAAGATAGGTAAGTT

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MISTIEDMQYLEDIFNKFYTIGSNNQGGVTRLGYSEEEDKMHNIFKLIGEEEGFQTYEDEVGNTYVLNNQESNEHYLIGS
HLDSVINGGRYDGVAGVIAGLMILKWAKKDKLNIPIKVVAFRCEESSNFGMCTIGSGLITNEISKNDIENLVSKKGKTLK
EIFGKKGYSLNPKKISNIKQYLELHIEQGKVLEEYRVRVGVVSDIAAPRRFNIYIQGEAEHSGATPMNMRYDALCAASEV
ILSIEKIGKKEAMKKSVATVGVLNNSPNVLNVIPGEVKLGVDIRGIDKNSLNSMEEEIREVSENISKKRNVEIFIEKTSE
LLPVKMSQYMQERLAECCKKTKISYKILPSGAGHDAMVFPKICDTALIFIPCSKGISHNKNEFTSLESILDGTKVMYEYL
KGEIYK

Sequences:

>Translated_406_residues
MISTIEDMQYLEDIFNKFYTIGSNNQGGVTRLGYSEEEDKMHNIFKLIGEEEGFQTYEDEVGNTYVLNNQESNEHYLIGS
HLDSVINGGRYDGVAGVIAGLMILKWAKKDKLNIPIKVVAFRCEESSNFGMCTIGSGLITNEISKNDIENLVSKKGKTLK
EIFGKKGYSLNPKKISNIKQYLELHIEQGKVLEEYRVRVGVVSDIAAPRRFNIYIQGEAEHSGATPMNMRYDALCAASEV
ILSIEKIGKKEAMKKSVATVGVLNNSPNVLNVIPGEVKLGVDIRGIDKNSLNSMEEEIREVSENISKKRNVEIFIEKTSE
LLPVKMSQYMQERLAECCKKTKISYKILPSGAGHDAMVFPKICDTALIFIPCSKGISHNKNEFTSLESILDGTKVMYEYL
KGEIYK
>Mature_406_residues
MISTIEDMQYLEDIFNKFYTIGSNNQGGVTRLGYSEEEDKMHNIFKLIGEEEGFQTYEDEVGNTYVLNNQESNEHYLIGS
HLDSVINGGRYDGVAGVIAGLMILKWAKKDKLNIPIKVVAFRCEESSNFGMCTIGSGLITNEISKNDIENLVSKKGKTLK
EIFGKKGYSLNPKKISNIKQYLELHIEQGKVLEEYRVRVGVVSDIAAPRRFNIYIQGEAEHSGATPMNMRYDALCAASEV
ILSIEKIGKKEAMKKSVATVGVLNNSPNVLNVIPGEVKLGVDIRGIDKNSLNSMEEEIREVSENISKKRNVEIFIEKTSE
LLPVKMSQYMQERLAECCKKTKISYKILPSGAGHDAMVFPKICDTALIFIPCSKGISHNKNEFTSLESILDGTKVMYEYL
KGEIYK

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=397, Percent_Identity=34.2569269521411, Blast_Score=221, Evalue=6e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR001261
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: 3.5.3.- [C]

Molecular weight: Translated: 45491; Mature: 45491

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISTIEDMQYLEDIFNKFYTIGSNNQGGVTRLGYSEEEDKMHNIFKLIGEEEGFQTYEDE
CCCCHHHHHHHHHHHHHHEECCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHH
VGNTYVLNNQESNEHYLIGSHLDSVINGGRYDGVAGVIAGLMILKWAKKDKLNIPIKVVA
CCCEEEECCCCCCCEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEE
FRCEESSNFGMCTIGSGLITNEISKNDIENLVSKKGKTLKEIFGKKGYSLNPKKISNIKQ
EEECCCCCCCEEEECCCHHHCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHH
YLELHIEQGKVLEEYRVRVGVVSDIAAPRRFNIYIQGEAEHSGATPMNMRYDALCAASEV
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHH
ILSIEKIGKKEAMKKSVATVGVLNNSPNVLNVIPGEVKLGVDIRGIDKNSLNSMEEEIRE
HHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCEEEEEEEECCCCHHHHHHHHHHHH
VSENISKKRNVEIFIEKTSELLPVKMSQYMQERLAECCKKTKISYKILPSGAGHDAMVFP
HHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEECH
KICDTALIFIPCSKGISHNKNEFTSLESILDGTKVMYEYLKGEIYK
HHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MISTIEDMQYLEDIFNKFYTIGSNNQGGVTRLGYSEEEDKMHNIFKLIGEEEGFQTYEDE
CCCCHHHHHHHHHHHHHHEECCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHH
VGNTYVLNNQESNEHYLIGSHLDSVINGGRYDGVAGVIAGLMILKWAKKDKLNIPIKVVA
CCCEEEECCCCCCCEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEE
FRCEESSNFGMCTIGSGLITNEISKNDIENLVSKKGKTLKEIFGKKGYSLNPKKISNIKQ
EEECCCCCCCEEEECCCHHHCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHH
YLELHIEQGKVLEEYRVRVGVVSDIAAPRRFNIYIQGEAEHSGATPMNMRYDALCAASEV
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHH
ILSIEKIGKKEAMKKSVATVGVLNNSPNVLNVIPGEVKLGVDIRGIDKNSLNSMEEEIRE
HHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCEEEEEEEECCCCHHHHHHHHHHHH
VSENISKKRNVEIFIEKTSELLPVKMSQYMQERLAECCKKTKISYKILPSGAGHDAMVFP
HHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEECH
KICDTALIFIPCSKGISHNKNEFTSLESILDGTKVMYEYLKGEIYK
HHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]