Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210630

Identifier: 28210630

GI number: 28210630

Start: 975595

End: 976845

Strand: Direct

Name: 28210630

Synonym: CTC00919

Alternate gene names: NA

Gene position: 975595-976845 (Clockwise)

Preceding gene: 28210629

Following gene: 28210631

Centisome position: 34.85

GC content: 24.14

Gene sequence:

>1251_bases
ATGAAATTTAAATATGCTATTAGAGGAATATCAAGCAGATTTTTTTATTCATTTTTAATTATTGCTCAATTAATTTTTGG
ATTTTATTCTATGTATGAAAACATAAATTTATATAAAAAAATGAATTTGGAGACAAACAAGGTAGAAAAATTTTTTAAAG
ATAAAAAAGCTTATGCCTTAGAGGTTGAAAGTATCAATTATAATAGTAATGATATAGAATTTCAAAAAATAATGGATGCT
TTCAGGATAATGGAAGATAGTTCTAAGTATACTTTTATAAAAACTACAATGACAGGAGAGATGATTCCTACTTTTAATAA
TTATAAACAATTTGCAGCAAGTGATTTTGAAGCTAATTCTAATGGTAAAACATGTTTTCAATTTAAGCATAATAGTATAA
ATAAATCATATCTTAAAACCTATCCGTTAAAGGTTGAAAAAGGAAGATTATTTACCAGTAATGAATTTGATTTTATTGGT
AAAGATAGTTTTGTATTTCCTATTGTAGTTGGAGCAAATTATGGTAAATATTTTAAAGTAGGAGATGAATTTCTACTAGA
TTCAAGTAAAAAACGAATAGGCAAAATAATAGGAATACTTAAAGAAGATGAGTGTGGTCCCGGAGATATATGCCAGCCAG
ATATTAGATATATAAATTTAAATAACTATATTATATCTACAGATGCAATTTATGAAAGCAAACTAATTTTATGTGATTTG
ACATTATATAATGCAAATTACATTCTATTTGATAATTCTACAAATGAATCTGAAATATATAAGGAGCTTACAAAAATTAA
AAAAATGTTTAATGATATACCTGTTATAAGGGAAGCTGGTATAAGGGATTTGACAAAATATGTAACTCAAGATTTGGACA
TGCTTAAAGAACAATATGAAATAGTAGTTATAACATCTATTAGTGTCATTATATTTGTATGTATAACATTTATTATATCA
ATATTGGATTCTATAAATAAAAGAAAAAAGGAATATGGTATACATATTATGAGTGGAGGAAAATTATCTGATATTGCTGG
AATTACGTATTTAGAAATATTTATTACTTTTTTTATGGCATATATGATTACAGCATCAATTATATACTATAGAGATGGAA
GATTAATAAATACTAATAGCTTACTTATGTTATTGATTTTAATGGTAGCTATATCTACAGTTTCAGCCTTAATTCCCATA
ATAAGAATATTTAATTTAGATGTTAGTCAATTAGTTAAAGGGGATGAATAG

Upstream 100 bases:

>100_bases
TTATTTTTATATTAATTATAGGAAGTATAGTTATCAGCATAAGTGCATTTAATATAAATAAAACTCAAATAAGTTATCTT
ATCAAAGGGAAGGTATAATT

Downstream 100 bases:

>100_bases
ATATGGAAATTATAAAATTAAATAATGTAAATAAGATATATTCTTCAAAACAAAATAAAGTAAATGCATTAAACAATATA
AATTTAAATATTAACAAAGG

Product: membrane-spanning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MKFKYAIRGISSRFFYSFLIIAQLIFGFYSMYENINLYKKMNLETNKVEKFFKDKKAYALEVESINYNSNDIEFQKIMDA
FRIMEDSSKYTFIKTTMTGEMIPTFNNYKQFAASDFEANSNGKTCFQFKHNSINKSYLKTYPLKVEKGRLFTSNEFDFIG
KDSFVFPIVVGANYGKYFKVGDEFLLDSSKKRIGKIIGILKEDECGPGDICQPDIRYINLNNYIISTDAIYESKLILCDL
TLYNANYILFDNSTNESEIYKELTKIKKMFNDIPVIREAGIRDLTKYVTQDLDMLKEQYEIVVITSISVIIFVCITFIIS
ILDSINKRKKEYGIHIMSGGKLSDIAGITYLEIFITFFMAYMITASIIYYRDGRLINTNSLLMLLILMVAISTVSALIPI
IRIFNLDVSQLVKGDE

Sequences:

>Translated_416_residues
MKFKYAIRGISSRFFYSFLIIAQLIFGFYSMYENINLYKKMNLETNKVEKFFKDKKAYALEVESINYNSNDIEFQKIMDA
FRIMEDSSKYTFIKTTMTGEMIPTFNNYKQFAASDFEANSNGKTCFQFKHNSINKSYLKTYPLKVEKGRLFTSNEFDFIG
KDSFVFPIVVGANYGKYFKVGDEFLLDSSKKRIGKIIGILKEDECGPGDICQPDIRYINLNNYIISTDAIYESKLILCDL
TLYNANYILFDNSTNESEIYKELTKIKKMFNDIPVIREAGIRDLTKYVTQDLDMLKEQYEIVVITSISVIIFVCITFIIS
ILDSINKRKKEYGIHIMSGGKLSDIAGITYLEIFITFFMAYMITASIIYYRDGRLINTNSLLMLLILMVAISTVSALIPI
IRIFNLDVSQLVKGDE
>Mature_416_residues
MKFKYAIRGISSRFFYSFLIIAQLIFGFYSMYENINLYKKMNLETNKVEKFFKDKKAYALEVESINYNSNDIEFQKIMDA
FRIMEDSSKYTFIKTTMTGEMIPTFNNYKQFAASDFEANSNGKTCFQFKHNSINKSYLKTYPLKVEKGRLFTSNEFDFIG
KDSFVFPIVVGANYGKYFKVGDEFLLDSSKKRIGKIIGILKEDECGPGDICQPDIRYINLNNYIISTDAIYESKLILCDL
TLYNANYILFDNSTNESEIYKELTKIKKMFNDIPVIREAGIRDLTKYVTQDLDMLKEQYEIVVITSISVIIFVCITFIIS
ILDSINKRKKEYGIHIMSGGKLSDIAGITYLEIFITFFMAYMITASIIYYRDGRLINTNSLLMLLILMVAISTVSALIPI
IRIFNLDVSQLVKGDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48098; Mature: 48098

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKYAIRGISSRFFYSFLIIAQLIFGFYSMYENINLYKKMNLETNKVEKFFKDKKAYAL
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCEEE
EVESINYNSNDIEFQKIMDAFRIMEDSSKYTFIKTTMTGEMIPTFNNYKQFAASDFEANS
EEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHCCCCCCCC
NGKTCFQFKHNSINKSYLKTYPLKVEKGRLFTSNEFDFIGKDSFVFPIVVGANYGKYFKV
CCCEEEEEECCCCCHHHHHCCCEEEECCEEEECCCCCCCCCCCEEEEEEEECCCCCEEEC
GDEFLLDSSKKRIGKIIGILKEDECGPGDICQPDIRYINLNNYIISTDAIYESKLILCDL
CHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCEEEECCCEECCEEEEEEE
TLYNANYILFDNSTNESEIYKELTKIKKMFNDIPVIREAGIRDLTKYVTQDLDMLKEQYE
EEECCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHCCC
IVVITSISVIIFVCITFIISILDSINKRKKEYGIHIMSGGKLSDIAGITYLEIFITFFMA
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHH
YMITASIIYYRDGRLINTNSLLMLLILMVAISTVSALIPIIRIFNLDVSQLVKGDE
HHHHHHEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
>Mature Secondary Structure
MKFKYAIRGISSRFFYSFLIIAQLIFGFYSMYENINLYKKMNLETNKVEKFFKDKKAYAL
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCEEE
EVESINYNSNDIEFQKIMDAFRIMEDSSKYTFIKTTMTGEMIPTFNNYKQFAASDFEANS
EEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHCCCCCCCC
NGKTCFQFKHNSINKSYLKTYPLKVEKGRLFTSNEFDFIGKDSFVFPIVVGANYGKYFKV
CCCEEEEEECCCCCHHHHHCCCEEEECCEEEECCCCCCCCCCCEEEEEEEECCCCCEEEC
GDEFLLDSSKKRIGKIIGILKEDECGPGDICQPDIRYINLNNYIISTDAIYESKLILCDL
CHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCEEEECCCEECCEEEEEEE
TLYNANYILFDNSTNESEIYKELTKIKKMFNDIPVIREAGIRDLTKYVTQDLDMLKEQYE
EEECCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHCCC
IVVITSISVIIFVCITFIISILDSINKRKKEYGIHIMSGGKLSDIAGITYLEIFITFFMA
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHH
YMITASIIYYRDGRLINTNSLLMLLILMVAISTVSALIPIIRIFNLDVSQLVKGDE
HHHHHHEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA