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The map label for this gene is gntR

Identifier: 28210604

GI number: 28210604

Start: 947049

End: 947684

Strand: Direct

Name: gntR

Synonym: CTC00893

Alternate gene names: NA

Gene position: 947049-947684 (Clockwise)

Preceding gene: 28210603

Following gene: 28210605

Centisome position: 33.83

GC content: 29.4

Gene sequence:

>636_bases
ATGAAATGTCACCAAGGTGGGGCGTTATATAAAAATATAGCACTTGATATTGCCAATAGAATTGTGATGGGCGAACTTAA
GATTGATGAAAAAATAAGCGGAAGGTCTACTTTAGCAAGTATGTATAATGTATCACCTGAAACTATAAGACGGGCTATTG
CTTTATTAGAAGATATGGATGTTGTACTTTCTACTAAAGGTAGTGGTATAGAAATTTTATCTGTTTCTGCAGCTGAAAGA
TTTATAGAAAAACATAAAGATAATGAATATTTGGCTACAGTTAGGGAAAATATAGTAGAACTTATGGATAGAAAGAAAAA
AATAGATAATGAAATTCAAATCAACTTTGATAAAATATTGGATTTTACAGATAGGTTTAAAAATATAACCCCATTTACTT
TAATAGAAGTAGAAGTAAAAAAAGAGTGTGTTGTATTGGGCAAAAAAGTTAACGAATTAAGATTTTGGCAAGCTACAGGA
GCAACTATACTTGCTTATAGAAGAAAGGGAAATATTATAATCTCACCAGGTCCTAACTATGTGTTTCAAGAGGAAGATGT
AATAGTAGTAATAGGAAATGGTAATGTATATGAGAAAATAAATAGATTTTTATATAACGTCAATAAAGATGAGTAA

Upstream 100 bases:

>100_bases
ATGAAAAAATATAAAGAAAATATATCAATATAATTATATATATAGTAATGGATGACTATTATTTATAATAATAAAATATA
TAGTAAATGGAGGAAATAGT

Downstream 100 bases:

>100_bases
AAATCAATTTAAAAAGAATGTAAGTCATTTAATGGTCTTACATTTTTTTTAGATTAAAATTTTACATGCACCATAAATAT
ATTGATTGTGTATCATAGTA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; TrkA Domain-Containing Protein; Regulatory Protein; Transcriptional Repressor BusR; GntR Family Regulatory Protein; TrkA-C Domain Protein; Regulatory Protein GntR HTH; TrkA-C Domain-Containing Protein; Fused Transcriptional Regulator/Membrane Protein; Gntr-Family Transcriptional Regulator; GntR Family Transcription Regulator

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MKCHQGGALYKNIALDIANRIVMGELKIDEKISGRSTLASMYNVSPETIRRAIALLEDMDVVLSTKGSGIEILSVSAAER
FIEKHKDNEYLATVRENIVELMDRKKKIDNEIQINFDKILDFTDRFKNITPFTLIEVEVKKECVVLGKKVNELRFWQATG
ATILAYRRKGNIIISPGPNYVFQEEDVIVVIGNGNVYEKINRFLYNVNKDE

Sequences:

>Translated_211_residues
MKCHQGGALYKNIALDIANRIVMGELKIDEKISGRSTLASMYNVSPETIRRAIALLEDMDVVLSTKGSGIEILSVSAAER
FIEKHKDNEYLATVRENIVELMDRKKKIDNEIQINFDKILDFTDRFKNITPFTLIEVEVKKECVVLGKKVNELRFWQATG
ATILAYRRKGNIIISPGPNYVFQEEDVIVVIGNGNVYEKINRFLYNVNKDE
>Mature_211_residues
MKCHQGGALYKNIALDIANRIVMGELKIDEKISGRSTLASMYNVSPETIRRAIALLEDMDVVLSTKGSGIEILSVSAAER
FIEKHKDNEYLATVRENIVELMDRKKKIDNEIQINFDKILDFTDRFKNITPFTLIEVEVKKECVVLGKKVNELRFWQATG
ATILAYRRKGNIIISPGPNYVFQEEDVIVVIGNGNVYEKINRFLYNVNKDE

Specific function: Unknown

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24073; Mature: 24073

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCHQGGALYKNIALDIANRIVMGELKIDEKISGRSTLASMYNVSPETIRRAIALLEDMD
CCCCCCCCHHHHHHHHHHCEEEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCH
VVLSTKGSGIEILSVSAAERFIEKHKDNEYLATVRENIVELMDRKKKIDNEIQINFDKIL
HEEECCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHH
DFTDRFKNITPFTLIEVEVKKECVVLGKKVNELRFWQATGATILAYRRKGNIIISPGPNY
HHHHHHCCCCCEEEEEEEECCHHHHHCCHHHHEEEEECCCCEEEEEEECCCEEECCCCCE
VFQEEDVIVVIGNGNVYEKINRFLYNVNKDE
EEECCCEEEEECCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKCHQGGALYKNIALDIANRIVMGELKIDEKISGRSTLASMYNVSPETIRRAIALLEDMD
CCCCCCCCHHHHHHHHHHCEEEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCH
VVLSTKGSGIEILSVSAAERFIEKHKDNEYLATVRENIVELMDRKKKIDNEIQINFDKIL
HEEECCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHH
DFTDRFKNITPFTLIEVEVKKECVVLGKKVNELRFWQATGATILAYRRKGNIIISPGPNY
HHHHHHCCCCCEEEEEEEECCHHHHHCCHHHHEEEEECCCCEEEEEEECCCEEECCCCCE
VFQEEDVIVVIGNGNVYEKINRFLYNVNKDE
EEECCCEEEEECCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA