Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210462

Identifier: 28210462

GI number: 28210462

Start: 766346

End: 767098

Strand: Direct

Name: 28210462

Synonym: CTC00742

Alternate gene names: NA

Gene position: 766346-767098 (Clockwise)

Preceding gene: 28210461

Following gene: 28210463

Centisome position: 27.38

GC content: 28.95

Gene sequence:

>753_bases
ATGAGAATAAGTAAAGTTAGAGATCTTACATTAATTAAGTTAACAGAGGATAAAAATTTAGTAGTTGCCTGTGATAGTTG
TGGAGGTATTGGTAGTAAACCTGAAGATGCATTAAAAGTACCAGCATATATTGTTGGAAAACTAACAGCAAGGGTAGCTT
TAATGGAGGTTTTATGTACAGGAGCAGAAATAGTTACTATAACGGATGCTGTTTGCAATGAAATGGAGCCTACAGGAAAA
GAAATAATAAGAGGAATAAAAGAAGAATTAAAAGAAGCAAAAATAAATGAGGTAACTTTAAATGGTAGTACAGAAGAAAA
TTTTCCTACTAAGGCTACAGGTCTTGGAGTAACTGTAGTTGGCATTGTAGATAATAATAATATGAAAGTAAACAATATAA
CAAAAGATTGTTTACTCATATCTATTGGAATTCCAAAGGTGGGAAAGGAAATAGATATATTTGGATATGATGAAGAAATA
GCAAGTTATAATAATATATCTACAATATTAAATAATCAAGAAGCTTATGAAATAGTTCCAGTAGGATCTAAAGGTATATT
ATTTGAAGCTGAAGAACTAGCTAAAAATAATAGATGTGAATTTTATCTAAATAAAGATAAAATTGATGTAGATATAAGAA
GAAGTGCAGGACCTGCTACAGTTATAATTGCAGCGGTTTCAAAAAAAGCCTATGAAAATCTAAAGGATATACAAAATATA
AATCTTTTAGGAGAAATAAAAAAAGGAACTTAA

Upstream 100 bases:

>100_bases
GGAATATTTGCATTAGTGCCTGTACTTTCAGGAGTAGCTGCGATAAATGCAGTAGTTGCAGTATTAATTTATAAATTTTT
ACCAAGGAGCTTAAAGAAAT

Downstream 100 bases:

>100_bases
ATATTATAAAGTCAAAAGAAAGGAAAGATGTTTTTATGTCAAAGAAAGGTATCTTAGTAGTAAGTTTTGGGACAAGTTAT
GAGGAAACAAGAAAGGTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MRISKVRDLTLIKLTEDKNLVVACDSCGGIGSKPEDALKVPAYIVGKLTARVALMEVLCTGAEIVTITDAVCNEMEPTGK
EIIRGIKEELKEAKINEVTLNGSTEENFPTKATGLGVTVVGIVDNNNMKVNNITKDCLLISIGIPKVGKEIDIFGYDEEI
ASYNNISTILNNQEAYEIVPVGSKGILFEAEELAKNNRCEFYLNKDKIDVDIRRSAGPATVIIAAVSKKAYENLKDIQNI
NLLGEIKKGT

Sequences:

>Translated_250_residues
MRISKVRDLTLIKLTEDKNLVVACDSCGGIGSKPEDALKVPAYIVGKLTARVALMEVLCTGAEIVTITDAVCNEMEPTGK
EIIRGIKEELKEAKINEVTLNGSTEENFPTKATGLGVTVVGIVDNNNMKVNNITKDCLLISIGIPKVGKEIDIFGYDEEI
ASYNNISTILNNQEAYEIVPVGSKGILFEAEELAKNNRCEFYLNKDKIDVDIRRSAGPATVIIAAVSKKAYENLKDIQNI
NLLGEIKKGT
>Mature_250_residues
MRISKVRDLTLIKLTEDKNLVVACDSCGGIGSKPEDALKVPAYIVGKLTARVALMEVLCTGAEIVTITDAVCNEMEPTGK
EIIRGIKEELKEAKINEVTLNGSTEENFPTKATGLGVTVVGIVDNNNMKVNNITKDCLLISIGIPKVGKEIDIFGYDEEI
ASYNNISTILNNQEAYEIVPVGSKGILFEAEELAKNNRCEFYLNKDKIDVDIRRSAGPATVIIAAVSKKAYENLKDIQNI
NLLGEIKKGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27191; Mature: 27191

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISKVRDLTLIKLTEDKNLVVACDSCGGIGSKPEDALKVPAYIVGKLTARVALMEVLCT
CCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHC
GAEIVTITDAVCNEMEPTGKEIIRGIKEELKEAKINEVTLNGSTEENFPTKATGLGVTVV
CCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEE
GIVDNNNMKVNNITKDCLLISIGIPKVGKEIDIFGYDEEIASYNNISTILNNQEAYEIVP
EEEECCCEEEECCCCEEEEEEECCCCCCCEEEEEECCHHHHCCCCHHHHHCCCCCEEEEE
VGSKGILFEAEELAKNNRCEFYLNKDKIDVDIRRSAGPATVIIAAVSKKAYENLKDIQNI
ECCCCEEEEHHHHHCCCCEEEEECCCCEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHCC
NLLGEIKKGT
CEEEEECCCC
>Mature Secondary Structure
MRISKVRDLTLIKLTEDKNLVVACDSCGGIGSKPEDALKVPAYIVGKLTARVALMEVLCT
CCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHC
GAEIVTITDAVCNEMEPTGKEIIRGIKEELKEAKINEVTLNGSTEENFPTKATGLGVTVV
CCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEE
GIVDNNNMKVNNITKDCLLISIGIPKVGKEIDIFGYDEEIASYNNISTILNNQEAYEIVP
EEEECCCEEEECCCCEEEEEEECCCCCCCEEEEEECCHHHHCCCCHHHHHCCCCCEEEEE
VGSKGILFEAEELAKNNRCEFYLNKDKIDVDIRRSAGPATVIIAAVSKKAYENLKDIQNI
ECCCCEEEEHHHHHCCCCEEEEECCCCEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHCC
NLLGEIKKGT
CEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA