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The map label for this gene is qmcA [H]

Identifier: 28210405

GI number: 28210405

Start: 698197

End: 699138

Strand: Direct

Name: qmcA [H]

Synonym: CTC00681

Alternate gene names: 28210405

Gene position: 698197-699138 (Clockwise)

Preceding gene: 28210404

Following gene: 28210407

Centisome position: 24.94

GC content: 30.15

Gene sequence:

>942_bases
ATGATTGGAAAAATAATACTAATAATATTACTATTAATAATATTATCAGCAGTTTTATCAACAATAAAGATTGTAAATAC
AGGTAGTCTTTATGTAGTGGAGAGATTTGGACAATTCTACAAGATATTAGAACCAGGATGGCATTTTACAATTCCATTTG
CAGATTTTGTTAGAAAGAAAGTTTCTACAAAACAACAAATACTTGATATAGAGCCTCAAAATGTTATAACTCAGGATAAT
GTTAGAATATCTATAGATAATGTTATATTTTACAGAGTTATGAATGCAAAAGATGCTGTATATAATATAGAAAATTATAA
ATCAGGTATTGTTTACTCAACTATAACTAATATGAGAAATATAGTAGGTAATATGACTTTAGATGAAGTTTTATCAGGAA
GAGATAAAATAAACAATGATCTTTTAAGAGTAGTTGATGAAATTACCGATGCTTACGGAATAAAGATTTTGTCAGTAGAA
ATAAAAAATATAATTCCGCCAGCAGAAATACAACAAGCTATGGAAAAGCAAATGAAGGCAGAAAGAGATAAGAGAGCCAC
AATTCTTCAAGCAGAAGGTCAAAAGCAAAGTGAAATTGAAAGAGCACAAGGTGAGAAGCAATCTAAAATTCTTCAAGCAG
AGGCCGAAAAAGAAGCTAATATAAGAAGGGCAGAAGGTTTTAGACAATCTCAAATATTAGAAGCAGAAGGTAAAGCACAA
GCTATCGAATCTGTAGCACAAGCACAGGCTAAAGCTGTTAGATTAGTAAATGCTTCTATATTAGAATCAGGAACTAATGA
GACAGTAATAGCATTAAAACAAGTAGAAGCCCTTCAAGAAATGGCTAAAAACCCAGCAAATAAACTTATACTTCCAAATG
AAACTGTATCTAGTTTAGGAAGTATAGCGGCTATTGGTGAAATGTTAAATAAAAATAAGTAA

Upstream 100 bases:

>100_bases
TACTAAACGAAGGTAAATTAATAAAAAAAGGGGAAAAGGCTAAAATAATAGCCTTAAATGGAAATAAGTTTATATTAAAA
AAATATGAGGAGGATGCGAA

Downstream 100 bases:

>100_bases
GTATAAAATAAAGAAAGGATAGATTTTCTATCCTTTCTTTATTAATTTAAAAACATACAAAGGAGTCGATTCTATTTAAA
TCTATACCGAAATAGGACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MIGKIILIILLLIILSAVLSTIKIVNTGSLYVVERFGQFYKILEPGWHFTIPFADFVRKKVSTKQQILDIEPQNVITQDN
VRISIDNVIFYRVMNAKDAVYNIENYKSGIVYSTITNMRNIVGNMTLDEVLSGRDKINNDLLRVVDEITDAYGIKILSVE
IKNIIPPAEIQQAMEKQMKAERDKRATILQAEGQKQSEIERAQGEKQSKILQAEAEKEANIRRAEGFRQSQILEAEGKAQ
AIESVAQAQAKAVRLVNASILESGTNETVIALKQVEALQEMAKNPANKLILPNETVSSLGSIAAIGEMLNKNK

Sequences:

>Translated_313_residues
MIGKIILIILLLIILSAVLSTIKIVNTGSLYVVERFGQFYKILEPGWHFTIPFADFVRKKVSTKQQILDIEPQNVITQDN
VRISIDNVIFYRVMNAKDAVYNIENYKSGIVYSTITNMRNIVGNMTLDEVLSGRDKINNDLLRVVDEITDAYGIKILSVE
IKNIIPPAEIQQAMEKQMKAERDKRATILQAEGQKQSEIERAQGEKQSKILQAEAEKEANIRRAEGFRQSQILEAEGKAQ
AIESVAQAQAKAVRLVNASILESGTNETVIALKQVEALQEMAKNPANKLILPNETVSSLGSIAAIGEMLNKNK
>Mature_313_residues
MIGKIILIILLLIILSAVLSTIKIVNTGSLYVVERFGQFYKILEPGWHFTIPFADFVRKKVSTKQQILDIEPQNVITQDN
VRISIDNVIFYRVMNAKDAVYNIENYKSGIVYSTITNMRNIVGNMTLDEVLSGRDKINNDLLRVVDEITDAYGIKILSVE
IKNIIPPAEIQQAMEKQMKAERDKRATILQAEGQKQSEIERAQGEKQSKILQAEAEKEANIRRAEGFRQSQILEAEGKAQ
AIESVAQAQAKAVRLVNASILESGTNETVIALKQVEALQEMAKNPANKLILPNETVSSLGSIAAIGEMLNKNK

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=266, Percent_Identity=35.3383458646617, Blast_Score=161, Evalue=6e-40,
Organism=Homo sapiens, GI38016911, Length=212, Percent_Identity=33.9622641509434, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI221316744, Length=218, Percent_Identity=30.2752293577982, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI21686995, Length=218, Percent_Identity=30.7339449541284, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI7657615, Length=186, Percent_Identity=26.8817204301075, Blast_Score=82, Evalue=7e-16,
Organism=Escherichia coli, GI1786697, Length=309, Percent_Identity=43.042071197411, Blast_Score=241, Evalue=4e-65,
Organism=Escherichia coli, GI1790616, Length=210, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1790617, Length=285, Percent_Identity=22.8070175438596, Blast_Score=66, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI32564147, Length=288, Percent_Identity=34.7222222222222, Blast_Score=162, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI17569493, Length=189, Percent_Identity=31.2169312169312, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI193209764, Length=189, Percent_Identity=31.2169312169312, Blast_Score=101, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17569499, Length=191, Percent_Identity=34.0314136125654, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI25153583, Length=193, Percent_Identity=31.6062176165803, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI71987612, Length=193, Percent_Identity=31.6062176165803, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI71987621, Length=193, Percent_Identity=31.6062176165803, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI32566490, Length=171, Percent_Identity=34.5029239766082, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17570459, Length=205, Percent_Identity=32.1951219512195, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71989955, Length=160, Percent_Identity=32.5, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71989948, Length=160, Percent_Identity=32.5, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17569497, Length=188, Percent_Identity=26.5957446808511, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI193210507, Length=196, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17570161, Length=196, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI45550506, Length=196, Percent_Identity=37.7551020408163, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24657857, Length=211, Percent_Identity=34.1232227488152, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI281365664, Length=202, Percent_Identity=33.1683168316832, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI62484448, Length=202, Percent_Identity=33.1683168316832, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI62484274, Length=202, Percent_Identity=33.1683168316832, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI281361631, Length=193, Percent_Identity=26.9430051813472, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281361633, Length=193, Percent_Identity=26.9430051813472, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI45556022, Length=195, Percent_Identity=30.2564102564103, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI21356845, Length=197, Percent_Identity=25.3807106598985, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI18860517, Length=195, Percent_Identity=31.2820512820513, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI28573263, Length=193, Percent_Identity=24.3523316062176, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281361635, Length=131, Percent_Identity=26.7175572519084, Blast_Score=79, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 34908; Mature: 34908

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGKIILIILLLIILSAVLSTIKIVNTGSLYVVERFGQFYKILEPGWHFTIPFADFVRKK
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCHHHHHHHH
VSTKQQILDIEPQNVITQDNVRISIDNVIFYRVMNAKDAVYNIENYKSGIVYSTITNMRN
HHHHHHHHCCCCCCCEECCCCEEEECCEEEEEECCCHHHHEEHHHHCCCCHHHHHHHHHH
IVGNMTLDEVLSGRDKINNDLLRVVDEITDAYGIKILSVEIKNIIPPAEIQQAMEKQMKA
HHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCEEEEEEEHHHCCCHHHHHHHHHHHHHH
ERDKRATILQAEGQKQSEIERAQGEKQSKILQAEAEKEANIRRAEGFRQSQILEAEGKAQ
HHHHHHEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHCCHHH
AIESVAQAQAKAVRLVNASILESGTNETVIALKQVEALQEMAKNPANKLILPNETVSSLG
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHH
SIAAIGEMLNKNK
HHHHHHHHHHCCC
>Mature Secondary Structure
MIGKIILIILLLIILSAVLSTIKIVNTGSLYVVERFGQFYKILEPGWHFTIPFADFVRKK
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCHHHHHHHH
VSTKQQILDIEPQNVITQDNVRISIDNVIFYRVMNAKDAVYNIENYKSGIVYSTITNMRN
HHHHHHHHCCCCCCCEECCCCEEEECCEEEEEECCCHHHHEEHHHHCCCCHHHHHHHHHH
IVGNMTLDEVLSGRDKINNDLLRVVDEITDAYGIKILSVEIKNIIPPAEIQQAMEKQMKA
HHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCEEEEEEEHHHCCCHHHHHHHHHHHHHH
ERDKRATILQAEGQKQSEIERAQGEKQSKILQAEAEKEANIRRAEGFRQSQILEAEGKAQ
HHHHHHEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHCCHHH
AIESVAQAQAKAVRLVNASILESGTNETVIALKQVEALQEMAKNPANKLILPNETVSSLG
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHH
SIAAIGEMLNKNK
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]