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The map label for this gene is 28210401

Identifier: 28210401

GI number: 28210401

Start: 694390

End: 695022

Strand: Direct

Name: 28210401

Synonym: CTC00677

Alternate gene names: NA

Gene position: 694390-695022 (Clockwise)

Preceding gene: 28210400

Following gene: 28210402

Centisome position: 24.81

GC content: 28.12

Gene sequence:

>633_bases
ATGGAAGAAAAACACACCATATTTAAAAATATAGAAAAACACTTACTACAAGATGAAAATCCTTCCGAATATTTGAATAA
ATTAAGTGAAGAGGGGTTTTTAAAAGAATATCCTTTTAACCTTTTAGAAAATTTAAAAAAGACCGAACAAAATTTAACCC
ATCACCCAGAAGGAAGTGTTTGGAATCATACTATGATGGTGCTAGATAGAGCAGCGAAAAATAAAGAATTTAGTGAGGAT
AGTAAAGCTTTTATGTGGGCAGCACTATTACATGATATAGGAAAAGGTACTACTACTAAAATAAGAAGGGGAAAGATAAC
TTCCTATAATCATGATAAAGAAGGAGAATTTTTATCTATAAAATTTTTAGAAGAATTTATAAATGATAAAGATTTTATAA
AAAAAGTAGCAGCTTTAGTAAGATGGCATATGCAACCTTTATTTGTAGCTAAAAAAATGAGTTTTGCTGATATAGATGGC
ATGAAAAAAGAATGTTCCCCAGAGGAAATAGCTCTTTTGTCAAAATGTGATAGATTGGGTAGAGGAGATATGAATGAAGA
TAAAATAAAAAAAGAGGAAGAAGATATAGAAGTTTTTTTAAATACTGCAAAAAAAGAAAGTACTAAAAAATAA

Upstream 100 bases:

>100_bases
TTATGGGATTTATTTATTAAGTATAGTAAAAATAGTATAATAAAAATAGTACATATGGATAAAAATATAGATAAATAGAG
AAGATGAGAAAGGAGATTTT

Downstream 100 bases:

>100_bases
TAAAAAATGCTATAATTAACAAGATAACTGATGACAAAGGAGAGGTTTAAATGAAAAATCCTATAATTACTATAACAATG
GAAAATGGAGATGTTATGAA

Product: putative poly A polymerase

Products: NA

Alternate protein names: HD Superfamily Hydrolase; Poly A Polymerase; Polynucleotide Adenylyltransferase Region; PolyA Polymerase-Like Protein; Metal Dependent Phophohydrolase; HD Domain-Containing Protein; HD Domain Protein; tRNA Nucleotidyltransferase/Poly(A) Polymerase; PolyA Polymerase Related Protein

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MEEKHTIFKNIEKHLLQDENPSEYLNKLSEEGFLKEYPFNLLENLKKTEQNLTHHPEGSVWNHTMMVLDRAAKNKEFSED
SKAFMWAALLHDIGKGTTTKIRRGKITSYNHDKEGEFLSIKFLEEFINDKDFIKKVAALVRWHMQPLFVAKKMSFADIDG
MKKECSPEEIALLSKCDRLGRGDMNEDKIKKEEEDIEVFLNTAKKESTKK

Sequences:

>Translated_210_residues
MEEKHTIFKNIEKHLLQDENPSEYLNKLSEEGFLKEYPFNLLENLKKTEQNLTHHPEGSVWNHTMMVLDRAAKNKEFSED
SKAFMWAALLHDIGKGTTTKIRRGKITSYNHDKEGEFLSIKFLEEFINDKDFIKKVAALVRWHMQPLFVAKKMSFADIDG
MKKECSPEEIALLSKCDRLGRGDMNEDKIKKEEEDIEVFLNTAKKESTKK
>Mature_210_residues
MEEKHTIFKNIEKHLLQDENPSEYLNKLSEEGFLKEYPFNLLENLKKTEQNLTHHPEGSVWNHTMMVLDRAAKNKEFSED
SKAFMWAALLHDIGKGTTTKIRRGKITSYNHDKEGEFLSIKFLEEFINDKDFIKKVAALVRWHMQPLFVAKKMSFADIDG
MKKECSPEEIALLSKCDRLGRGDMNEDKIKKEEEDIEVFLNTAKKESTKK

Specific function: Unknown

COG id: COG0617

COG function: function code J; tRNA nucleotidyltransferase/poly(A) polymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24540; Mature: 24540

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKHTIFKNIEKHLLQDENPSEYLNKLSEEGFLKEYPFNLLENLKKTEQNLTHHPEGSV
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCCCCH
WNHTMMVLDRAAKNKEFSEDSKAFMWAALLHDIGKGTTTKIRRGKITSYNHDKEGEFLSI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCEEHH
KFLEEFINDKDFIKKVAALVRWHMQPLFVAKKMSFADIDGMKKECSPEEIALLSKCDRLG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCCHHHHHHHHHHHHHC
RGDMNEDKIKKEEEDIEVFLNTAKKESTKK
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEEKHTIFKNIEKHLLQDENPSEYLNKLSEEGFLKEYPFNLLENLKKTEQNLTHHPEGSV
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCCCCH
WNHTMMVLDRAAKNKEFSEDSKAFMWAALLHDIGKGTTTKIRRGKITSYNHDKEGEFLSI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCEEHH
KFLEEFINDKDFIKKVAALVRWHMQPLFVAKKMSFADIDGMKKECSPEEIALLSKCDRLG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCCHHHHHHHHHHHHHC
RGDMNEDKIKKEEEDIEVFLNTAKKESTKK
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA