| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210391
Identifier: 28210391
GI number: 28210391
Start: 684841
End: 685269
Strand: Direct
Name: 28210391
Synonym: CTC00667
Alternate gene names: NA
Gene position: 684841-685269 (Clockwise)
Preceding gene: 28210390
Following gene: 28210395
Centisome position: 24.47
GC content: 27.27
Gene sequence:
>429_bases TTGGAGATATCGAGAATAGGCAATAGAACCCATGTAAGTTCTAAAGAAGATACTAAAGCTATTAGTAGCAAAAAAAGTTT TTCTCAAAGTTTTAATTTTGCAAGAGAAAGAAGATCTCAAGAACAGCTTGATAAAATGCTAGAAGATATAAAGAAAAAAG GAGAAAGATTAGTAACAACTAAGAGTTATGTAGATGTTATTCGCTATAAAAAAATGATAAAAGAATACTTAGAATCTGTT TTAAGTTTTATGTATGGAGTTAAAAAGGATATTAGCTTTTGGCAAACTCAATACTTTATCACCGTTGAAACTATAGATGA AAAGTTAGAAGAATTAACTCAAGCTTTATTGAATGATCAAAAAGAAAATTTAGATATAGCAAGTAGCATAGATGAAATAA CAGGGTTGTTAGTGGATATTTATAAATAA
Upstream 100 bases:
>100_bases GTGGAAATAATCTAAATAAATAAATATACATGCTATTTTTTTATAAAAAAGTAATATATAATAATAGTTGTAGGATTTTT TTACAAGGGAGGAAATTTCT
Downstream 100 bases:
>100_bases AAAAACAAGAAATGAAGTCTTGAATTTCATTTCTTGTTTTTTATTTTATATTTGTCCTATGAATTTTAAAATTAATTGTG CAATTAATGCTGATCCTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MEISRIGNRTHVSSKEDTKAISSKKSFSQSFNFARERRSQEQLDKMLEDIKKKGERLVTTKSYVDVIRYKKMIKEYLESV LSFMYGVKKDISFWQTQYFITVETIDEKLEELTQALLNDQKENLDIASSIDEITGLLVDIYK
Sequences:
>Translated_142_residues MEISRIGNRTHVSSKEDTKAISSKKSFSQSFNFARERRSQEQLDKMLEDIKKKGERLVTTKSYVDVIRYKKMIKEYLESV LSFMYGVKKDISFWQTQYFITVETIDEKLEELTQALLNDQKENLDIASSIDEITGLLVDIYK >Mature_142_residues MEISRIGNRTHVSSKEDTKAISSKKSFSQSFNFARERRSQEQLDKMLEDIKKKGERLVTTKSYVDVIRYKKMIKEYLESV LSFMYGVKKDISFWQTQYFITVETIDEKLEELTQALLNDQKENLDIASSIDEITGLLVDIYK
Specific function: Unknown
COG id: COG1728
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16663; Mature: 16663
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEISRIGNRTHVSSKEDTKAISSKKSFSQSFNFARERRSQEQLDKMLEDIKKKGERLVTT CCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSYVDVIRYKKMIKEYLESVLSFMYGVKKDISFWQTQYFITVETIDEKLEELTQALLNDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KENLDIASSIDEITGLLVDIYK CCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEISRIGNRTHVSSKEDTKAISSKKSFSQSFNFARERRSQEQLDKMLEDIKKKGERLVTT CCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSYVDVIRYKKMIKEYLESVLSFMYGVKKDISFWQTQYFITVETIDEKLEELTQALLNDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KENLDIASSIDEITGLLVDIYK CCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA