Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210391

Identifier: 28210391

GI number: 28210391

Start: 684841

End: 685269

Strand: Direct

Name: 28210391

Synonym: CTC00667

Alternate gene names: NA

Gene position: 684841-685269 (Clockwise)

Preceding gene: 28210390

Following gene: 28210395

Centisome position: 24.47

GC content: 27.27

Gene sequence:

>429_bases
TTGGAGATATCGAGAATAGGCAATAGAACCCATGTAAGTTCTAAAGAAGATACTAAAGCTATTAGTAGCAAAAAAAGTTT
TTCTCAAAGTTTTAATTTTGCAAGAGAAAGAAGATCTCAAGAACAGCTTGATAAAATGCTAGAAGATATAAAGAAAAAAG
GAGAAAGATTAGTAACAACTAAGAGTTATGTAGATGTTATTCGCTATAAAAAAATGATAAAAGAATACTTAGAATCTGTT
TTAAGTTTTATGTATGGAGTTAAAAAGGATATTAGCTTTTGGCAAACTCAATACTTTATCACCGTTGAAACTATAGATGA
AAAGTTAGAAGAATTAACTCAAGCTTTATTGAATGATCAAAAAGAAAATTTAGATATAGCAAGTAGCATAGATGAAATAA
CAGGGTTGTTAGTGGATATTTATAAATAA

Upstream 100 bases:

>100_bases
GTGGAAATAATCTAAATAAATAAATATACATGCTATTTTTTTATAAAAAAGTAATATATAATAATAGTTGTAGGATTTTT
TTACAAGGGAGGAAATTTCT

Downstream 100 bases:

>100_bases
AAAAACAAGAAATGAAGTCTTGAATTTCATTTCTTGTTTTTTATTTTATATTTGTCCTATGAATTTTAAAATTAATTGTG
CAATTAATGCTGATCCTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MEISRIGNRTHVSSKEDTKAISSKKSFSQSFNFARERRSQEQLDKMLEDIKKKGERLVTTKSYVDVIRYKKMIKEYLESV
LSFMYGVKKDISFWQTQYFITVETIDEKLEELTQALLNDQKENLDIASSIDEITGLLVDIYK

Sequences:

>Translated_142_residues
MEISRIGNRTHVSSKEDTKAISSKKSFSQSFNFARERRSQEQLDKMLEDIKKKGERLVTTKSYVDVIRYKKMIKEYLESV
LSFMYGVKKDISFWQTQYFITVETIDEKLEELTQALLNDQKENLDIASSIDEITGLLVDIYK
>Mature_142_residues
MEISRIGNRTHVSSKEDTKAISSKKSFSQSFNFARERRSQEQLDKMLEDIKKKGERLVTTKSYVDVIRYKKMIKEYLESV
LSFMYGVKKDISFWQTQYFITVETIDEKLEELTQALLNDQKENLDIASSIDEITGLLVDIYK

Specific function: Unknown

COG id: COG1728

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16663; Mature: 16663

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEISRIGNRTHVSSKEDTKAISSKKSFSQSFNFARERRSQEQLDKMLEDIKKKGERLVTT
CCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSYVDVIRYKKMIKEYLESVLSFMYGVKKDISFWQTQYFITVETIDEKLEELTQALLNDQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KENLDIASSIDEITGLLVDIYK
CCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEISRIGNRTHVSSKEDTKAISSKKSFSQSFNFARERRSQEQLDKMLEDIKKKGERLVTT
CCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSYVDVIRYKKMIKEYLESVLSFMYGVKKDISFWQTQYFITVETIDEKLEELTQALLNDQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KENLDIASSIDEITGLLVDIYK
CCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA