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The map label for this gene is yjeB [C]

Identifier: 28210311

GI number: 28210311

Start: 596860

End: 597276

Strand: Direct

Name: yjeB [C]

Synonym: CTC00575

Alternate gene names: 28210311

Gene position: 596860-597276 (Clockwise)

Preceding gene: 28210309

Following gene: 28210312

Centisome position: 21.32

GC content: 28.3

Gene sequence:

>417_bases
GTGATGAGAATGAATATAACGCAAGAAGCAGATTATGGAATAAGAGCAGTTTTAATACTAGCCAAAGAAGGCGAAGGGGA
AAAATTAGATGCAAAAACTATTGCAGAAAGAGGGAATATTCCTTTAAGATTTTTATTAAAATTATTAAGAAAACTTATTC
AAGCAGGAATAGTACGTTCCTATAGAGGAGTAAATGGAGGATATGCCTTAAATAAACATAGTGAAGATATAAATTTAAAG
GAAGTTATAGAGTCTATAGATGGACCTATAGCAGTAAATAGATGTATAACAGATAAAGATTTTTGTAATGCAAAGAAGAC
AGAAATATGTGTTGTACATAAAGAGTTACGAAAAGTACAGAATATATTTGTTAAGGAGTTAGAGAAAATTACATTTTCTA
AATTAAAAAATTCTTAA

Upstream 100 bases:

>100_bases
AAGAGTATACAATAAAATACATAATTAAGAAAGAGGAGGCAAAGAAAGGTTATTTAAAGATATAAACTATTACGGAAATA
AAAAATAAAATTATTATAAG

Downstream 100 bases:

>100_bases
GTCTTATTGTATAAATTAAATACTTAATAAAATTTTTCTAGCCACTACATAAAAATAAACCTTTTTTATCGAAGTTAATT
ACTTTATTTTACACATTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MMRMNITQEADYGIRAVLILAKEGEGEKLDAKTIAERGNIPLRFLLKLLRKLIQAGIVRSYRGVNGGYALNKHSEDINLK
EVIESIDGPIAVNRCITDKDFCNAKKTEICVVHKELRKVQNIFVKELEKITFSKLKNS

Sequences:

>Translated_138_residues
MMRMNITQEADYGIRAVLILAKEGEGEKLDAKTIAERGNIPLRFLLKLLRKLIQAGIVRSYRGVNGGYALNKHSEDINLK
EVIESIDGPIAVNRCITDKDFCNAKKTEICVVHKELRKVQNIFVKELEKITFSKLKNS
>Mature_138_residues
MMRMNITQEADYGIRAVLILAKEGEGEKLDAKTIAERGNIPLRFLLKLLRKLIQAGIVRSYRGVNGGYALNKHSEDINLK
EVIESIDGPIAVNRCITDKDFCNAKKTEICVVHKELRKVQNIFVKELEKITFSKLKNS

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=132, Percent_Identity=28.030303030303, Blast_Score=63, Evalue=7e-12,
Organism=Escherichia coli, GI1788880, Length=134, Percent_Identity=29.8507462686567, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15644; Mature: 15644

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRMNITQEADYGIRAVLILAKEGEGEKLDAKTIAERGNIPLRFLLKLLRKLIQAGIVRS
CCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
YRGVNGGYALNKHSEDINLKEVIESIDGPIAVNRCITDKDFCNAKKTEICVVHKELRKVQ
HCCCCCCCEECCCCCCCCHHHHHHHCCCCEEEHHHCCCHHHCCCCCCHHHHHHHHHHHHH
NIFVKELEKITFSKLKNS
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMRMNITQEADYGIRAVLILAKEGEGEKLDAKTIAERGNIPLRFLLKLLRKLIQAGIVRS
CCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
YRGVNGGYALNKHSEDINLKEVIESIDGPIAVNRCITDKDFCNAKKTEICVVHKELRKVQ
HCCCCCCCEECCCCCCCCHHHHHHHCCCCEEEHHHCCCHHHCCCCCCHHHHHHHHHHHHH
NIFVKELEKITFSKLKNS
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9256491 [H]