| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is hppA
Identifier: 28210139
GI number: 28210139
Start: 374053
End: 376074
Strand: Direct
Name: hppA
Synonym: CTC00383
Alternate gene names: 28210139
Gene position: 374053-376074 (Clockwise)
Preceding gene: 28210138
Following gene: 28210140
Centisome position: 13.36
GC content: 36.89
Gene sequence:
>2022_bases ATGGAGAGTTTTATTGTTTATTCAGTCTTAGCTGGAGTAATAGCATTAATATTTGCTTTCATGCTAAGTAGTTTCATTTC CAAAGAAAGTGCAGGAAATGAAAGAATGCAAGAAATTGCTGGGCACATTCATGATGGAGCCATGGCTTTCTTGAAAACAG AATACAAATACTTAACGGGATTTATAGTAATTGTTACAGTAATTTTAGCTATCTTTGTAGGATGGCAAACAGCGGCATGC TTTATTTTAGGAGCTATATTCTCTATATTTGCAGGATATTTTGGAATGAATGTAGCTACAAAAGCCAATGTTAGAACAGC AGAGGCAGCAAGACATAGCCAAGGAAAGGCATTAAATATAGCTTTTTCAGGTGGAGCAGTAATGGGAATGTCTGTTGTAG GACTAGGGGTTGTAGGTATAGGAATTATGTATTACATATTTGGTGGTAATATGGAATTTGTAACAGGCTTTGGTCTTGGA GCAAGCTCTATTGCACTATTTGCTCGTGTTGGTGGTGGGATATACACCAAGGCGGCAGATGTTGGAGCAGATCTTGTTGG TAAAGTAGAAGCAGGTATACCAGAAGATGACCCAAGGAACCCAGCGGTAATAGCTGACAACGTAGGGGATAACGTTGGAG ATGTTGCAGGTATGGGAGCCGACCTTTTTGAATCTTATGTAGGATCAATTATATCTGCATTAACACTTGGAACAGTTGTA TACGCAAATAAAGAAGGAGTTATGTTTCCTTTAATTTTAAGCTCTATAGGAATAGTAGCGTCTATAATAGGAATATTATT TTCAAGAAAAAGTAAAGCAAAGGATCCTCAAAAAGCACTTAACACAGGAACTTATATAGGTGGAATTATAGTTATAGTAT CAGCAGCAATATTAAGTAATACTATATTTGGAAACCTTAAAGCTTTCTTTGCAGTAGCTTCTGGATTAGTTGTTGGAATG ATTATAGGTAAAATTACAGAAATGTATACATCAGATGCTTATTCATCAGTACAAAAGATTGCTAATCAATCAGAAACAGG ACCAGCTACTACAATTATTTCGGGTCTTGCAGTAGGAATGTACTCTACATTATGGCCAATAGTTTTAATTTCCATAGGTG TATTAGTTTCCTTCTTTGTAATGGGCGGAGGATCTAACGCTATGGTGGGACTGTATGGAATATCTTTAGCAGCAGTGGGA ATGCTTTCAACTACAGGATTAACTGTTGCAGTTGACGCATATGGACCAATTGCAGATAATGCTGGTGGAATAGCTGAAAT GTCAGAACTACCTCATGAAGTAAGAGAAATCACCGACAAACTTGACTCAGTTGGTAATACTACTGCGGCTATAGGAAAAG GTTTTGCTATAGGTTCTGCAGCACTTACTGCATTATCTTTATTCGCATCCTATGCACAAGCTACTGAATTGGAAAGTATA GACATACTTAATACAGTAACTTTAGTAGGTCTATTTATAGGAGCAATGCTTCCATTCTTATTTGGTGCTTTAACAATGGA ATCAGTTGGTAAGGCTGCAAATGAAATGATAGAAGAGGTTAGAAGACAATTTAAAACTATACCAGGAATAATGGAAGGAA AAGCTACACCAGACTATAAGAAATGTGTAGATATTTCTACAGCGGCAGCAATAAGAGAAATGATTCTTCCAGGTGTATTA GCAATAGTAGTACCAGTAGCAATGGGGCTCTTATTAGGTAAAGAAGCCCTTGGTGGACTACTAGCAGGGGCACTTGTGAG TGGAGTTCTTGTAGGTATACTTATGTCTAATGCTGGTGGAGCATGGGATAATGCTAAAAAATATATTGAAGGTGGAGCTC ATGGTGGAAAAGGAAGTGAAGCTCATAAAGCAGCTGTAGTTGGAGACACTGTTGGTGACCCATTTAAAGATACTTCAGGA CCTTCAATGAATATATTAATAAAACTTATGACAATAGTTTCATTAGTATTTGCACCAGTCGTTTTACAATATGGTGGAAT ATTATTAAACTTAATTAAATAG
Upstream 100 bases:
>100_bases TAAACCTAGTTTAAATCTTGGGAAAATTTTATATGTTTTTACAAATGTATGAAATTAAAATAAAATAATTAAATTAAAGA AAGGTTAGGGGGATAAGATC
Downstream 100 bases:
>100_bases TTATTTATTTAAAAACCCTAGGATAAAATAAATATCCCTAGGGTTTTTTACATTCTTGACTAACAAACAATATTAATATA GTATTTTATTTAAATATTGG
Product: membrane-bound proton-translocating pyrophosphatase
Products: NA
Alternate protein names: Membrane-bound sodium-translocating pyrophosphatase; Pyrophosphate-energized inorganic pyrophosphatase; Na(+)-PPase
Number of amino acids: Translated: 673; Mature: 673
Protein sequence:
>673_residues MESFIVYSVLAGVIALIFAFMLSSFISKESAGNERMQEIAGHIHDGAMAFLKTEYKYLTGFIVIVTVILAIFVGWQTAAC FILGAIFSIFAGYFGMNVATKANVRTAEAARHSQGKALNIAFSGGAVMGMSVVGLGVVGIGIMYYIFGGNMEFVTGFGLG ASSIALFARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYVGSIISALTLGTVV YANKEGVMFPLILSSIGIVASIIGILFSRKSKAKDPQKALNTGTYIGGIIVIVSAAILSNTIFGNLKAFFAVASGLVVGM IIGKITEMYTSDAYSSVQKIANQSETGPATTIISGLAVGMYSTLWPIVLISIGVLVSFFVMGGGSNAMVGLYGISLAAVG MLSTTGLTVAVDAYGPIADNAGGIAEMSELPHEVREITDKLDSVGNTTAAIGKGFAIGSAALTALSLFASYAQATELESI DILNTVTLVGLFIGAMLPFLFGALTMESVGKAANEMIEEVRRQFKTIPGIMEGKATPDYKKCVDISTAAAIREMILPGVL AIVVPVAMGLLLGKEALGGLLAGALVSGVLVGILMSNAGGAWDNAKKYIEGGAHGGKGSEAHKAAVVGDTVGDPFKDTSG PSMNILIKLMTIVSLVFAPVVLQYGGILLNLIK
Sequences:
>Translated_673_residues MESFIVYSVLAGVIALIFAFMLSSFISKESAGNERMQEIAGHIHDGAMAFLKTEYKYLTGFIVIVTVILAIFVGWQTAAC FILGAIFSIFAGYFGMNVATKANVRTAEAARHSQGKALNIAFSGGAVMGMSVVGLGVVGIGIMYYIFGGNMEFVTGFGLG ASSIALFARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYVGSIISALTLGTVV YANKEGVMFPLILSSIGIVASIIGILFSRKSKAKDPQKALNTGTYIGGIIVIVSAAILSNTIFGNLKAFFAVASGLVVGM IIGKITEMYTSDAYSSVQKIANQSETGPATTIISGLAVGMYSTLWPIVLISIGVLVSFFVMGGGSNAMVGLYGISLAAVG MLSTTGLTVAVDAYGPIADNAGGIAEMSELPHEVREITDKLDSVGNTTAAIGKGFAIGSAALTALSLFASYAQATELESI DILNTVTLVGLFIGAMLPFLFGALTMESVGKAANEMIEEVRRQFKTIPGIMEGKATPDYKKCVDISTAAAIREMILPGVL AIVVPVAMGLLLGKEALGGLLAGALVSGVLVGILMSNAGGAWDNAKKYIEGGAHGGKGSEAHKAAVVGDTVGDPFKDTSG PSMNILIKLMTIVSLVFAPVVLQYGGILLNLIK >Mature_673_residues MESFIVYSVLAGVIALIFAFMLSSFISKESAGNERMQEIAGHIHDGAMAFLKTEYKYLTGFIVIVTVILAIFVGWQTAAC FILGAIFSIFAGYFGMNVATKANVRTAEAARHSQGKALNIAFSGGAVMGMSVVGLGVVGIGIMYYIFGGNMEFVTGFGLG ASSIALFARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYVGSIISALTLGTVV YANKEGVMFPLILSSIGIVASIIGILFSRKSKAKDPQKALNTGTYIGGIIVIVSAAILSNTIFGNLKAFFAVASGLVVGM IIGKITEMYTSDAYSSVQKIANQSETGPATTIISGLAVGMYSTLWPIVLISIGVLVSFFVMGGGSNAMVGLYGISLAAVG MLSTTGLTVAVDAYGPIADNAGGIAEMSELPHEVREITDKLDSVGNTTAAIGKGFAIGSAALTALSLFASYAQATELESI DILNTVTLVGLFIGAMLPFLFGALTMESVGKAANEMIEEVRRQFKTIPGIMEGKATPDYKKCVDISTAAAIREMILPGVL AIVVPVAMGLLLGKEALGGLLAGALVSGVLVGILMSNAGGAWDNAKKYIEGGAHGGKGSEAHKAAVVGDTVGDPFKDTSG PSMNILIKLMTIVSLVFAPVVLQYGGILLNLIK
Specific function: Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane
COG id: COG3808
COG function: function code C; Inorganic pyrophosphatase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HPPA_CLOTE (Q898Q9)
Other databases:
- EMBL: AE015927 - RefSeq: NP_781083.1 - ProteinModelPortal: Q898Q9 - GeneID: 1059962 - GenomeReviews: AE015927_GR - KEGG: ctc:CTC00383 - NMPDR: fig|212717.1.peg.305 - HOGENOM: HBG593668 - OMA: AYLARQY - ProtClustDB: PRK00733 - BioCyc: CTET212717:CTC_00383-MONOMER - BRENDA: 3.6.1.1 - HAMAP: MF_01129 - InterPro: IPR004131 - PIRSF: PIRSF001265 - TIGRFAMs: TIGR01104
Pfam domain/function: PF03030 H_PPase
EC number: =3.6.1.1
Molecular weight: Translated: 69283; Mature: 69283
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xb0bc9e4)-; HASH(0xc3c1854)-; HASH(0xb3b946c)-; HASH(0xb54bfe4)-; HASH(0xc150d24)-; HASH(0xbd836cc)-; HASH(0xc308380)-; HASH(0xc0ab32c)-; HASH(0xc8d99f8)-; HASH(0xb3b394c)-; HASH(0xc75e4cc)-; HASH(0xbd151d4)-; HASH(0x40713b90)-; HASH(0xcb1f224)-; HASH(0xc938f64)-; HASH(0xb360224)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESFIVYSVLAGVIALIFAFMLSSFISKESAGNERMQEIAGHIHDGAMAFLKTEYKYLTG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIVIVTVILAIFVGWQTAACFILGAIFSIFAGYFGMNVATKANVRTAEAARHSQGKALNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEE AFSGGAVMGMSVVGLGVVGIGIMYYIFGGNMEFVTGFGLGASSIALFARVGGGIYTKAAD EECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCEEHHHH VGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYVGSIISALTLGTVV HCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHE YANKEGVMFPLILSSIGIVASIIGILFSRKSKAKDPQKALNTGTYIGGIIVIVSAAILSN EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHH TIFGNLKAFFAVASGLVVGMIIGKITEMYTSDAYSSVQKIANQSETGPATTIISGLAVGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH YSTLWPIVLISIGVLVSFFVMGGGSNAMVGLYGISLAAVGMLSTTGLTVAVDAYGPIADN HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC AGGIAEMSELPHEVREITDKLDSVGNTTAAIGKGFAIGSAALTALSLFASYAQATELESI CCCHHHHHHCHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHH DILNTVTLVGLFIGAMLPFLFGALTMESVGKAANEMIEEVRRQFKTIPGIMEGKATPDYK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH KCVDISTAAAIREMILPGVLAIVVPVAMGLLLGKEALGGLLAGALVSGVLVGILMSNAGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AWDNAKKYIEGGAHGGKGSEAHKAAVVGDTVGDPFKDTSGPSMNILIKLMTIVSLVFAPV CCHHHHHHHCCCCCCCCCCCHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VLQYGGILLNLIK HHHHHHHHHHHCH >Mature Secondary Structure MESFIVYSVLAGVIALIFAFMLSSFISKESAGNERMQEIAGHIHDGAMAFLKTEYKYLTG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIVIVTVILAIFVGWQTAACFILGAIFSIFAGYFGMNVATKANVRTAEAARHSQGKALNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEE AFSGGAVMGMSVVGLGVVGIGIMYYIFGGNMEFVTGFGLGASSIALFARVGGGIYTKAAD EECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCEEHHHH VGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYVGSIISALTLGTVV HCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHE YANKEGVMFPLILSSIGIVASIIGILFSRKSKAKDPQKALNTGTYIGGIIVIVSAAILSN EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHH TIFGNLKAFFAVASGLVVGMIIGKITEMYTSDAYSSVQKIANQSETGPATTIISGLAVGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH YSTLWPIVLISIGVLVSFFVMGGGSNAMVGLYGISLAAVGMLSTTGLTVAVDAYGPIADN HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC AGGIAEMSELPHEVREITDKLDSVGNTTAAIGKGFAIGSAALTALSLFASYAQATELESI CCCHHHHHHCHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHH DILNTVTLVGLFIGAMLPFLFGALTMESVGKAANEMIEEVRRQFKTIPGIMEGKATPDYK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH KCVDISTAAAIREMILPGVLAIVVPVAMGLLLGKEALGGLLAGALVSGVLVGILMSNAGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AWDNAKKYIEGGAHGGKGSEAHKAAVVGDTVGDPFKDTSGPSMNILIKLMTIVSLVFAPV CCHHHHHHHCCCCCCCCCCCHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VLQYGGILLNLIK HHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12552129