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The map label for this gene is ycsE [H]

Identifier: 28210122

GI number: 28210122

Start: 353817

End: 354638

Strand: Direct

Name: ycsE [H]

Synonym: CTC00366

Alternate gene names: 28210122

Gene position: 353817-354638 (Clockwise)

Preceding gene: 28210121

Following gene: 28210123

Centisome position: 12.64

GC content: 27.37

Gene sequence:

>822_bases
TTGTCATATAAATTAATATGTATTGATATAGATGGGACATTATTAAGAGACGATAAAAAGTTAAGTCAAAGAAATATAAA
TGCTATAAAAGCTGCAACTAAGAAAGGTGTTCATGTAGCTATAAGTACAGGAAGAATATTTCCTTCAGCAAATTACTATG
CTGAATTGATAGGAGTGAAATCACCAGTTATAGCTTCAAATGGAGCATATATTAAAAACAGCAGTGAGGATAAGATAATA
TATGAAAAAACTATGGAATATGAAAAGACTATAAAAATTATAAATATATTAAAGGAATATAAACTACGTCCACACTTTAA
TACGCATAATAAAATTCTTACAGAAAGTTTAGAGTTTTCAAAGAAAGTTTATTCTAAAATGAATGAAGTATTATCAAAAA
ATAATAAAGTGGATATAGAATTAGTAGATACTTGGGAAAATGCACTCAAAACATATGAGCATGAAATATTAAAGGCTATA
ATCGTAGACGAGGATATAAATAAAATAAAAGAAGTTAAAGAAATAGTTGCAAGAGAAGAAGGAATAGAGGTAGTGAGTTC
TCATAATAATAATTTTGAAGTTATGAGTAAGGGTATATCAAAGGGAAATGCTGTTAATATTTTAGCAGATATGTTAGGAA
TAAAGAAGGAAAAGGTAATGTGTATAGGAGATAGTGAAAATGACTTATCTATGATAAAATTTGCAGGCTTAGGAGTAGCT
ATGGGAAATGCAGCAGAATGTATAAAAGAATATGCAGACTATATTACAGATACAAATAACGAAGATGGTGTAGCAAAAGC
TATAGAAAAATTTATAATATAA

Upstream 100 bases:

>100_bases
ATAAATTATTTAAAGGAATAAGTTAACATTATATTTAAAAAGAAAATACAACTTTTTGGTATAATAAAATATATATATAA
ATAAGAGAGGATGTTTTTAA

Downstream 100 bases:

>100_bases
AACTTTACTATTTTTGAAGAATAGAGTAAGATATGTTATGTAAATTTTAATTCCTTATGTATAAGGGGGAGAATATCTTG
AATTTAAATATAGTTTTGTT

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSYKLICIDIDGTLLRDDKKLSQRNINAIKAATKKGVHVAISTGRIFPSANYYAELIGVKSPVIASNGAYIKNSSEDKII
YEKTMEYEKTIKIINILKEYKLRPHFNTHNKILTESLEFSKKVYSKMNEVLSKNNKVDIELVDTWENALKTYEHEILKAI
IVDEDINKIKEVKEIVAREEGIEVVSSHNNNFEVMSKGISKGNAVNILADMLGIKKEKVMCIGDSENDLSMIKFAGLGVA
MGNAAECIKEYADYITDTNNEDGVAKAIEKFII

Sequences:

>Translated_273_residues
MSYKLICIDIDGTLLRDDKKLSQRNINAIKAATKKGVHVAISTGRIFPSANYYAELIGVKSPVIASNGAYIKNSSEDKII
YEKTMEYEKTIKIINILKEYKLRPHFNTHNKILTESLEFSKKVYSKMNEVLSKNNKVDIELVDTWENALKTYEHEILKAI
IVDEDINKIKEVKEIVAREEGIEVVSSHNNNFEVMSKGISKGNAVNILADMLGIKKEKVMCIGDSENDLSMIKFAGLGVA
MGNAAECIKEYADYITDTNNEDGVAKAIEKFII
>Mature_272_residues
SYKLICIDIDGTLLRDDKKLSQRNINAIKAATKKGVHVAISTGRIFPSANYYAELIGVKSPVIASNGAYIKNSSEDKIIY
EKTMEYEKTIKIINILKEYKLRPHFNTHNKILTESLEFSKKVYSKMNEVLSKNNKVDIELVDTWENALKTYEHEILKAII
VDEDINKIKEVKEIVAREEGIEVVSSHNNNFEVMSKGISKGNAVNILADMLGIKKEKVMCIGDSENDLSMIKFAGLGVAM
GNAAECIKEYADYITDTNNEDGVAKAIEKFII

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=279, Percent_Identity=34.0501792114695, Blast_Score=140, Evalue=8e-35,
Organism=Escherichia coli, GI1786982, Length=273, Percent_Identity=24.9084249084249, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1787043, Length=279, Percent_Identity=26.5232974910394, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI87081790, Length=281, Percent_Identity=24.1992882562278, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001757
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 30648; Mature: 30517

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYKLICIDIDGTLLRDDKKLSQRNINAIKAATKKGVHVAISTGRIFPSANYYAELIGVK
CCEEEEEEECCCEEECCCHHHHHHCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCC
SPVIASNGAYIKNSSEDKIIYEKTMEYEKTIKIINILKEYKLRPHFNTHNKILTESLEFS
CCEEECCCCEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
KKVYSKMNEVLSKNNKVDIELVDTWENALKTYEHEILKAIIVDEDINKIKEVKEIVAREE
HHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIEVVSSHNNNFEVMSKGISKGNAVNILADMLGIKKEKVMCIGDSENDLSMIKFAGLGVA
CCHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHEEEECCCEE
MGNAAECIKEYADYITDTNNEDGVAKAIEKFII
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SYKLICIDIDGTLLRDDKKLSQRNINAIKAATKKGVHVAISTGRIFPSANYYAELIGVK
CEEEEEEECCCEEECCCHHHHHHCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCC
SPVIASNGAYIKNSSEDKIIYEKTMEYEKTIKIINILKEYKLRPHFNTHNKILTESLEFS
CCEEECCCCEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
KKVYSKMNEVLSKNNKVDIELVDTWENALKTYEHEILKAIIVDEDINKIKEVKEIVAREE
HHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIEVVSSHNNNFEVMSKGISKGNAVNILADMLGIKKEKVMCIGDSENDLSMIKFAGLGVA
CCHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHEEEECCCEE
MGNAAECIKEYADYITDTNNEDGVAKAIEKFII
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]