Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is bmrU [H]

Identifier: 28210106

GI number: 28210106

Start: 335684

End: 336631

Strand: Direct

Name: bmrU [H]

Synonym: CTC00349

Alternate gene names: 28210106

Gene position: 335684-336631 (Clockwise)

Preceding gene: 28210105

Following gene: 28210107

Centisome position: 11.99

GC content: 28.59

Gene sequence:

>948_bases
ATGAGTAAAGTGAAATTTATTTATAATCCATATTCAGGAGAAAACGCTATAATTTCAGACCTAGATACTGTTATAGATGT
CCATCAAAAATATGGATATACTGTAATTCCTTATAGGATAAGTATGGAACATGAATTATCTGAGGCCTTTGAAGATATAG
ATGAAACCTATGATTACATATTAGTAGCAGGTGGAGACGGTACTGTAGATAACGTAGTAAATTATATGAAAAATTTAAAT
ATAGACTTACCTATTGGTATTTTACCAGTAGGTACAGCTAATGATTTTGCTAAATTTATAGAGATTCCAGGAGATATTGG
AGCTGCCTGTGAACAGATTTTAGATAGTGAACCTAAAGAAATAGATATTGGTAAGGTGAATGATAAATATTTTATTAATG
TAGCTAGTACAGGGTTATTTACAGACGTATCTCAAAAAACTGATGTGAACTTAAAAAATACCATTGGTAAATTGGCATAC
TATGTAAAAGGCATAGAACAGCTTCCTAACTTTAGGAAAATAAATATAAAAGTTACCTCAGAAGTGCAAAACTTTGAAGG
TGATATGTATTTAATGCTAGTTTTCAATGGTGAAACTGCAGGAAACTTTAAACTAGCATATAAATCTAAAATAGATGATG
GTTTGTTAGATGTCATAATAATTAGAGCGGGTATGATTATAGACATAATACCTCTTTTTATAAAAATATTAAGAGGGGAA
CACCTAGAAAATGTAAATGGTATATTATATTTTAAAACAGATAAACTTACAATAGAATGTAATGATGATATAGCTACAGA
TATAGATGGAGAAAAAGGACCTAACTTTCCTTTGTATATAGAGTGCATAAAAGGTGGAATTAAAGTATTAGGAGTGAAAA
ATACAAAGGGTAGAAATACAAACAAAAAAATTAAAATTATAAAAAATAGAATTCACGGTAATTCATAA

Upstream 100 bases:

>100_bases
CTATTAAATCCACAAGAATATAAAATCTTCTTGTGGATTTATTTACTTTACTAATATATAATATTCATGCAGAGTAATTA
TAATAAGGGAGCCATATTAT

Downstream 100 bases:

>100_bases
AATAAAAAAGTGTGTAGCACTTTTTTTATTTTATGAATAATGAACAATTTAGGTGGATTTTCTTCCGCTTTGCTGCAGAA
AATCTTTGATTTTTTCCAGG

Product: putative lipid kinase

Products: NA

Alternate protein names: DAG kinase; DAGK [H]

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MSKVKFIYNPYSGENAIISDLDTVIDVHQKYGYTVIPYRISMEHELSEAFEDIDETYDYILVAGGDGTVDNVVNYMKNLN
IDLPIGILPVGTANDFAKFIEIPGDIGAACEQILDSEPKEIDIGKVNDKYFINVASTGLFTDVSQKTDVNLKNTIGKLAY
YVKGIEQLPNFRKINIKVTSEVQNFEGDMYLMLVFNGETAGNFKLAYKSKIDDGLLDVIIIRAGMIIDIIPLFIKILRGE
HLENVNGILYFKTDKLTIECNDDIATDIDGEKGPNFPLYIECIKGGIKVLGVKNTKGRNTNKKIKIIKNRIHGNS

Sequences:

>Translated_315_residues
MSKVKFIYNPYSGENAIISDLDTVIDVHQKYGYTVIPYRISMEHELSEAFEDIDETYDYILVAGGDGTVDNVVNYMKNLN
IDLPIGILPVGTANDFAKFIEIPGDIGAACEQILDSEPKEIDIGKVNDKYFINVASTGLFTDVSQKTDVNLKNTIGKLAY
YVKGIEQLPNFRKINIKVTSEVQNFEGDMYLMLVFNGETAGNFKLAYKSKIDDGLLDVIIIRAGMIIDIIPLFIKILRGE
HLENVNGILYFKTDKLTIECNDDIATDIDGEKGPNFPLYIECIKGGIKVLGVKNTKGRNTNKKIKIIKNRIHGNS
>Mature_314_residues
SKVKFIYNPYSGENAIISDLDTVIDVHQKYGYTVIPYRISMEHELSEAFEDIDETYDYILVAGGDGTVDNVVNYMKNLNI
DLPIGILPVGTANDFAKFIEIPGDIGAACEQILDSEPKEIDIGKVNDKYFINVASTGLFTDVSQKTDVNLKNTIGKLAYY
VKGIEQLPNFRKINIKVTSEVQNFEGDMYLMLVFNGETAGNFKLAYKSKIDDGLLDVIIIRAGMIIDIIPLFIKILRGEH
LENVNGILYFKTDKLTIECNDDIATDIDGEKGPNFPLYIECIKGGIKVLGVKNTKGRNTNKKIKIIKNRIHGNS

Specific function: Catalyzes the phosphorylation of diacylglycerol (DAG) into phosphatidic acid. Is a key enzyme involved in the production of lipoteichoic acid by reintroducing DAG formed from the breakdown of membrane phospholipids into the phosphatidylglycerol biosynthet

COG id: COG1597

COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DAGKc domain [H]

Homologues:

Organism=Escherichia coli, GI1788402, Length=279, Percent_Identity=27.2401433691756, Blast_Score=95, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017438
- InterPro:   IPR005218
- InterPro:   IPR001206 [H]

Pfam domain/function: PF00781 DAGK_cat [H]

EC number: =2.7.1.107 [H]

Molecular weight: Translated: 35179; Mature: 35048

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVKFIYNPYSGENAIISDLDTVIDVHQKYGYTVIPYRISMEHELSEAFEDIDETYDYI
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHCCCCEE
LVAGGDGTVDNVVNYMKNLNIDLPIGILPVGTANDFAKFIEIPGDIGAACEQILDSEPKE
EEECCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHCCCCCE
IDIGKVNDKYFINVASTGLFTDVSQKTDVNLKNTIGKLAYYVKGIEQLPNFRKINIKVTS
EEEEECCCEEEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEE
EVQNFEGDMYLMLVFNGETAGNFKLAYKSKIDDGLLDVIIIRAGMIIDIIPLFIKILRGE
CHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCC
HLENVNGILYFKTDKLTIECNDDIATDIDGEKGPNFPLYIECIKGGIKVLGVKNTKGRNT
CCCCCCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCC
NKKIKIIKNRIHGNS
CCCEEEEEECCCCCC
>Mature Secondary Structure 
SKVKFIYNPYSGENAIISDLDTVIDVHQKYGYTVIPYRISMEHELSEAFEDIDETYDYI
CCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHCCCCEE
LVAGGDGTVDNVVNYMKNLNIDLPIGILPVGTANDFAKFIEIPGDIGAACEQILDSEPKE
EEECCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHCCCCCE
IDIGKVNDKYFINVASTGLFTDVSQKTDVNLKNTIGKLAYYVKGIEQLPNFRKINIKVTS
EEEEECCCEEEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEE
EVQNFEGDMYLMLVFNGETAGNFKLAYKSKIDDGLLDVIIIRAGMIIDIIPLFIKILRGE
CHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCC
HLENVNGILYFKTDKLTIECNDDIATDIDGEKGPNFPLYIECIKGGIKVLGVKNTKGRNT
CCCCCCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCC
NKKIKIIKNRIHGNS
CCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]