| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is bmrU [H]
Identifier: 28210106
GI number: 28210106
Start: 335684
End: 336631
Strand: Direct
Name: bmrU [H]
Synonym: CTC00349
Alternate gene names: 28210106
Gene position: 335684-336631 (Clockwise)
Preceding gene: 28210105
Following gene: 28210107
Centisome position: 11.99
GC content: 28.59
Gene sequence:
>948_bases ATGAGTAAAGTGAAATTTATTTATAATCCATATTCAGGAGAAAACGCTATAATTTCAGACCTAGATACTGTTATAGATGT CCATCAAAAATATGGATATACTGTAATTCCTTATAGGATAAGTATGGAACATGAATTATCTGAGGCCTTTGAAGATATAG ATGAAACCTATGATTACATATTAGTAGCAGGTGGAGACGGTACTGTAGATAACGTAGTAAATTATATGAAAAATTTAAAT ATAGACTTACCTATTGGTATTTTACCAGTAGGTACAGCTAATGATTTTGCTAAATTTATAGAGATTCCAGGAGATATTGG AGCTGCCTGTGAACAGATTTTAGATAGTGAACCTAAAGAAATAGATATTGGTAAGGTGAATGATAAATATTTTATTAATG TAGCTAGTACAGGGTTATTTACAGACGTATCTCAAAAAACTGATGTGAACTTAAAAAATACCATTGGTAAATTGGCATAC TATGTAAAAGGCATAGAACAGCTTCCTAACTTTAGGAAAATAAATATAAAAGTTACCTCAGAAGTGCAAAACTTTGAAGG TGATATGTATTTAATGCTAGTTTTCAATGGTGAAACTGCAGGAAACTTTAAACTAGCATATAAATCTAAAATAGATGATG GTTTGTTAGATGTCATAATAATTAGAGCGGGTATGATTATAGACATAATACCTCTTTTTATAAAAATATTAAGAGGGGAA CACCTAGAAAATGTAAATGGTATATTATATTTTAAAACAGATAAACTTACAATAGAATGTAATGATGATATAGCTACAGA TATAGATGGAGAAAAAGGACCTAACTTTCCTTTGTATATAGAGTGCATAAAAGGTGGAATTAAAGTATTAGGAGTGAAAA ATACAAAGGGTAGAAATACAAACAAAAAAATTAAAATTATAAAAAATAGAATTCACGGTAATTCATAA
Upstream 100 bases:
>100_bases CTATTAAATCCACAAGAATATAAAATCTTCTTGTGGATTTATTTACTTTACTAATATATAATATTCATGCAGAGTAATTA TAATAAGGGAGCCATATTAT
Downstream 100 bases:
>100_bases AATAAAAAAGTGTGTAGCACTTTTTTTATTTTATGAATAATGAACAATTTAGGTGGATTTTCTTCCGCTTTGCTGCAGAA AATCTTTGATTTTTTCCAGG
Product: putative lipid kinase
Products: NA
Alternate protein names: DAG kinase; DAGK [H]
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MSKVKFIYNPYSGENAIISDLDTVIDVHQKYGYTVIPYRISMEHELSEAFEDIDETYDYILVAGGDGTVDNVVNYMKNLN IDLPIGILPVGTANDFAKFIEIPGDIGAACEQILDSEPKEIDIGKVNDKYFINVASTGLFTDVSQKTDVNLKNTIGKLAY YVKGIEQLPNFRKINIKVTSEVQNFEGDMYLMLVFNGETAGNFKLAYKSKIDDGLLDVIIIRAGMIIDIIPLFIKILRGE HLENVNGILYFKTDKLTIECNDDIATDIDGEKGPNFPLYIECIKGGIKVLGVKNTKGRNTNKKIKIIKNRIHGNS
Sequences:
>Translated_315_residues MSKVKFIYNPYSGENAIISDLDTVIDVHQKYGYTVIPYRISMEHELSEAFEDIDETYDYILVAGGDGTVDNVVNYMKNLN IDLPIGILPVGTANDFAKFIEIPGDIGAACEQILDSEPKEIDIGKVNDKYFINVASTGLFTDVSQKTDVNLKNTIGKLAY YVKGIEQLPNFRKINIKVTSEVQNFEGDMYLMLVFNGETAGNFKLAYKSKIDDGLLDVIIIRAGMIIDIIPLFIKILRGE HLENVNGILYFKTDKLTIECNDDIATDIDGEKGPNFPLYIECIKGGIKVLGVKNTKGRNTNKKIKIIKNRIHGNS >Mature_314_residues SKVKFIYNPYSGENAIISDLDTVIDVHQKYGYTVIPYRISMEHELSEAFEDIDETYDYILVAGGDGTVDNVVNYMKNLNI DLPIGILPVGTANDFAKFIEIPGDIGAACEQILDSEPKEIDIGKVNDKYFINVASTGLFTDVSQKTDVNLKNTIGKLAYY VKGIEQLPNFRKINIKVTSEVQNFEGDMYLMLVFNGETAGNFKLAYKSKIDDGLLDVIIIRAGMIIDIIPLFIKILRGEH LENVNGILYFKTDKLTIECNDDIATDIDGEKGPNFPLYIECIKGGIKVLGVKNTKGRNTNKKIKIIKNRIHGNS
Specific function: Catalyzes the phosphorylation of diacylglycerol (DAG) into phosphatidic acid. Is a key enzyme involved in the production of lipoteichoic acid by reintroducing DAG formed from the breakdown of membrane phospholipids into the phosphatidylglycerol biosynthet
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DAGKc domain [H]
Homologues:
Organism=Escherichia coli, GI1788402, Length=279, Percent_Identity=27.2401433691756, Blast_Score=95, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017438 - InterPro: IPR005218 - InterPro: IPR001206 [H]
Pfam domain/function: PF00781 DAGK_cat [H]
EC number: =2.7.1.107 [H]
Molecular weight: Translated: 35179; Mature: 35048
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVKFIYNPYSGENAIISDLDTVIDVHQKYGYTVIPYRISMEHELSEAFEDIDETYDYI CCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHCCCCEE LVAGGDGTVDNVVNYMKNLNIDLPIGILPVGTANDFAKFIEIPGDIGAACEQILDSEPKE EEECCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHCCCCCE IDIGKVNDKYFINVASTGLFTDVSQKTDVNLKNTIGKLAYYVKGIEQLPNFRKINIKVTS EEEEECCCEEEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEE EVQNFEGDMYLMLVFNGETAGNFKLAYKSKIDDGLLDVIIIRAGMIIDIIPLFIKILRGE CHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCC HLENVNGILYFKTDKLTIECNDDIATDIDGEKGPNFPLYIECIKGGIKVLGVKNTKGRNT CCCCCCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCC NKKIKIIKNRIHGNS CCCEEEEEECCCCCC >Mature Secondary Structure SKVKFIYNPYSGENAIISDLDTVIDVHQKYGYTVIPYRISMEHELSEAFEDIDETYDYI CCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHCCCCEE LVAGGDGTVDNVVNYMKNLNIDLPIGILPVGTANDFAKFIEIPGDIGAACEQILDSEPKE EEECCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHHCCCCCE IDIGKVNDKYFINVASTGLFTDVSQKTDVNLKNTIGKLAYYVKGIEQLPNFRKINIKVTS EEEEECCCEEEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEE EVQNFEGDMYLMLVFNGETAGNFKLAYKSKIDDGLLDVIIIRAGMIIDIIPLFIKILRGE CHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCC HLENVNGILYFKTDKLTIECNDDIATDIDGEKGPNFPLYIECIKGGIKVLGVKNTKGRNT CCCCCCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCC NKKIKIIKNRIHGNS CCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]