Click here to switch to the map view.

The map label for this gene is zupT [H]

Identifier: 28210065

GI number: 28210065

Start: 287974

End: 288684

Strand: Direct

Name: zupT [H]

Synonym: CTC00304

Alternate gene names: 28210065

Gene position: 287974-288684 (Clockwise)

Preceding gene: 28210064

Following gene: 28210066

Centisome position: 10.29

GC content: 34.46

Gene sequence:

>711_bases
TTGATTTATATGATAATAATAGGAAGTATTATATCCTTAGTGGGTACTGCTATAGGGGGACTGGTAGGCATAATGTTTAA
AAATCCTTCTGAAAAAGCCTTGGGATCACTACTAGGCTTTGCAGGCGGATTAATGCTAGCAGTGGTGGTATTTGATTTAA
TTCCAGAAGCTCTTACAAACTGGAATTTTATATATACAATTATATTCTGTATATTGGGGATAATATTTATAGCCTTTGTG
GATAAAAATATGAATAACGAGTATATTGATGAGCATAAGAAGATGGCTATAATAACAGCTTTAGGTCTTATGCTTCATAA
TTTTCCAGAAGGAATGATTATGGGCTGTGGTTTTGCAGCTGGAACTAACTTAGGAATAAAAATGAGTGTAGTTATTGCCA
TACATGATATACCAGAAGGTATGGCAGTAGCTACTCCTTTAATGGCATCTAAAGAAAATAGCTTTAAAATATTTTTATAT
ACGGTACTAACAGCCCTCCCAACAGCTTTAGGGGCTATTATAGGCGCTTTTATGGGACAGGTATCTAATAACTTACTAGG
AGCCAATCTATCCTTAGCATCAGGTATAATGCTCTATGTAGTGTGTGGAGAGATGCTTCCTCAATCTAATAAGTTATGGG
AAGGTGTATCTAGTACAATTGGAGTATTATCGGGATTGATTTTTGGACTAATTATAGTATATTTATTGTAG

Upstream 100 bases:

>100_bases
TAAAATAAGAGAATATAGAAACCTATAGATATAGGAATATTTATTTGTATTTTAAAATATTATCTAAGGAATAGTATTTT
AAAAGGGGTTTTAATAAAGT

Downstream 100 bases:

>100_bases
AAGATACAAAAGGAGATGTAGTTTTGGAAACAAAAGTTATAAAAACACATAAAGATAAATTAGAAAATAAAATATTAAAG
GAGTGCGGGGAAGCTCTGAG

Product: zinc uptake transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MIYMIIIGSIISLVGTAIGGLVGIMFKNPSEKALGSLLGFAGGLMLAVVVFDLIPEALTNWNFIYTIIFCILGIIFIAFV
DKNMNNEYIDEHKKMAIITALGLMLHNFPEGMIMGCGFAAGTNLGIKMSVVIAIHDIPEGMAVATPLMASKENSFKIFLY
TVLTALPTALGAIIGAFMGQVSNNLLGANLSLASGIMLYVVCGEMLPQSNKLWEGVSSTIGVLSGLIFGLIIVYLL

Sequences:

>Translated_236_residues
MIYMIIIGSIISLVGTAIGGLVGIMFKNPSEKALGSLLGFAGGLMLAVVVFDLIPEALTNWNFIYTIIFCILGIIFIAFV
DKNMNNEYIDEHKKMAIITALGLMLHNFPEGMIMGCGFAAGTNLGIKMSVVIAIHDIPEGMAVATPLMASKENSFKIFLY
TVLTALPTALGAIIGAFMGQVSNNLLGANLSLASGIMLYVVCGEMLPQSNKLWEGVSSTIGVLSGLIFGLIIVYLL
>Mature_236_residues
MIYMIIIGSIISLVGTAIGGLVGIMFKNPSEKALGSLLGFAGGLMLAVVVFDLIPEALTNWNFIYTIIFCILGIIFIAFV
DKNMNNEYIDEHKKMAIITALGLMLHNFPEGMIMGCGFAAGTNLGIKMSVVIAIHDIPEGMAVATPLMASKENSFKIFLY
TVLTALPTALGAIIGAFMGQVSNNLLGANLSLASGIMLYVVCGEMLPQSNKLWEGVSSTIGVLSGLIFGLIIVYLL

Specific function: Mediates zinc uptake. May also transport other divalent cations [H]

COG id: COG0428

COG function: function code P; Predicted divalent heavy-metal cations transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily [H]

Homologues:

Organism=Homo sapiens, GI187936949, Length=114, Percent_Identity=28.9473684210526, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI55741750, Length=114, Percent_Identity=28.9473684210526, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI229577418, Length=135, Percent_Identity=27.4074074074074, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI1789419, Length=234, Percent_Identity=26.4957264957265, Blast_Score=83, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17507805, Length=304, Percent_Identity=21.0526315789474, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003689 [H]

Pfam domain/function: PF02535 Zip [H]

EC number: NA

Molecular weight: Translated: 25075; Mature: 25075

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYMIIIGSIISLVGTAIGGLVGIMFKNPSEKALGSLLGFAGGLMLAVVVFDLIPEALTN
CEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
WNFIYTIIFCILGIIFIAFVDKNMNNEYIDEHKKMAIITALGLMLHNFPEGMIMGCGFAA
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHC
GTNLGIKMSVVIAIHDIPEGMAVATPLMASKENSFKIFLYTVLTALPTALGAIIGAFMGQ
CCCCCEEEEEEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VSNNLLGANLSLASGIMLYVVCGEMLPQSNKLWEGVSSTIGVLSGLIFGLIIVYLL
HHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MIYMIIIGSIISLVGTAIGGLVGIMFKNPSEKALGSLLGFAGGLMLAVVVFDLIPEALTN
CEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
WNFIYTIIFCILGIIFIAFVDKNMNNEYIDEHKKMAIITALGLMLHNFPEGMIMGCGFAA
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHC
GTNLGIKMSVVIAIHDIPEGMAVATPLMASKENSFKIFLYTVLTALPTALGAIIGAFMGQ
CCCCCEEEEEEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VSNNLLGANLSLASGIMLYVVCGEMLPQSNKLWEGVSSTIGVLSGLIFGLIIVYLL
HHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA