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The map label for this gene is ypeB [H]

Identifier: 28210052

GI number: 28210052

Start: 274467

End: 275834

Strand: Direct

Name: ypeB [H]

Synonym: CTC00290

Alternate gene names: 28210052

Gene position: 274467-275834 (Clockwise)

Preceding gene: 28210050

Following gene: 28210053

Centisome position: 9.81

GC content: 29.46

Gene sequence:

>1368_bases
ATGAAAAAGTCTAATAAAAGAGTTATTTATACTGCCATAGTAACTATAATAGTGGTTTTTTCATCTACTTTTGCCATTTT
AATGACTTTAGAAAGAACAGACTATAGAAATTATCTCCAAGCTCAATATAGTAAAAATATGTATGAGCTTATGGACTCTG
TTCAAAACATAAGAGTTAATTTAAGTAAGGCAGCTGTAGTGGGCTCAAGGGAACAGAATATAATCGTCTTTGATGAAATA
TTTAGGCATGCTACAAATGCCAATGATAGATTACATTCGTTGCCATTAAGTCAAGATACAATAGAAAATACCAGTAGATT
TTTATCCCAAGTAGGGGACTTCTGTTATACTTTAGGAAAAACTACTTCAGAAGGTACACAATTACAAGATAAGGATTATA
AAAACATAGAGGATTTAAAGAATAGATCCGTTAAATTAGAAGCTAATTTAAATCAAGTTAGCAATGACATAAACGAAGGG
AAAGTAAGATGGGGAGAAATAAGAAAGAAGGTAGGAGGAGTTCTTGCACGAAACAAGGAAGATATATCTGAACAATTTAA
AGGAATACAAAAGCAAGTAACCCAATATCCAGCATTAATTTATGATGGTCCCTTTTCAGATAATGTAGTAGAAATAGAGC
CAAGAATAAATAAAGAAAAAGAAATTTCAAAAGAAGAAGCAGAAAAAAAGATAAGAACTGTAATAGGCGAAAATAAAGTG
ACAAAAATAGATCTAGTTAATAAAGAAAGTAATACAGGAATAAGTACATATTCTTTTGAGGTAGGAGTAAAAGGTAGAAA
TGATAAAAGTGATAGAATTGTTTGTGAGGTAAGTAAAAAAGGTGGTAAAATATTATACTTGTTAGATAATAGGTTAGTTG
AAAGTAGCAAAATAAAAAGAGACACTGCTATGAAAAAAGGAGAAGAGTTTCTAAAAAGTATAGGATATAAAGAAATGGTA
CCAACTTATGCCATTGATTATGGCAACGTAGCCACTGTAAGCTATGTATACAAAAAAGATGATATAATGATATATCCAGA
TCAGATAAAATTAAAAATTGCATTAGATGATGGTAGTATAGTTGGTATTGAAAGTGCGAAATATCTTGTATCTCATACGA
ATAACAGAAATATTCCTAAAGCAAAAGTAAGTTTAGAAGAAGCAAGAAAAAAGGTTGGAAAGAGACTTAAAATAAAATCT
AGTAGATTGGCTATAATACCCACAGAAACTAATAAAGAAAAACTATGTTATGAATTTACAGGAGACTATAATGGAGAAAC
CTTTATAGTATATGTAAATGCACATACTGGTTATGAAGAGAGAATAATACAAATAATAAATGCACCTAATGGTCAATTAA
CTATTTGA

Upstream 100 bases:

>100_bases
TTAATATTATATCATATGACATTATTATTTAGGTTTAAATGAATAAATAATTAAATTTTTACAGATAATATTACAAGAAA
TTTTAATAGGAGGAATTAAA

Downstream 100 bases:

>100_bases
TATATATACTTAAATTAATAGATTAAAAAGTAGTTGATTAAATTAATAAAAGATTTTAAACTATTATTTAAGTAGTAAAA
TTTAATTGTTGTGCTTTTAG

Product: membrane-associated protein

Products: NA

Alternate protein names: PSPA12 [H]

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MKKSNKRVIYTAIVTIIVVFSSTFAILMTLERTDYRNYLQAQYSKNMYELMDSVQNIRVNLSKAAVVGSREQNIIVFDEI
FRHATNANDRLHSLPLSQDTIENTSRFLSQVGDFCYTLGKTTSEGTQLQDKDYKNIEDLKNRSVKLEANLNQVSNDINEG
KVRWGEIRKKVGGVLARNKEDISEQFKGIQKQVTQYPALIYDGPFSDNVVEIEPRINKEKEISKEEAEKKIRTVIGENKV
TKIDLVNKESNTGISTYSFEVGVKGRNDKSDRIVCEVSKKGGKILYLLDNRLVESSKIKRDTAMKKGEEFLKSIGYKEMV
PTYAIDYGNVATVSYVYKKDDIMIYPDQIKLKIALDDGSIVGIESAKYLVSHTNNRNIPKAKVSLEEARKKVGKRLKIKS
SRLAIIPTETNKEKLCYEFTGDYNGETFIVYVNAHTGYEERIIQIINAPNGQLTI

Sequences:

>Translated_455_residues
MKKSNKRVIYTAIVTIIVVFSSTFAILMTLERTDYRNYLQAQYSKNMYELMDSVQNIRVNLSKAAVVGSREQNIIVFDEI
FRHATNANDRLHSLPLSQDTIENTSRFLSQVGDFCYTLGKTTSEGTQLQDKDYKNIEDLKNRSVKLEANLNQVSNDINEG
KVRWGEIRKKVGGVLARNKEDISEQFKGIQKQVTQYPALIYDGPFSDNVVEIEPRINKEKEISKEEAEKKIRTVIGENKV
TKIDLVNKESNTGISTYSFEVGVKGRNDKSDRIVCEVSKKGGKILYLLDNRLVESSKIKRDTAMKKGEEFLKSIGYKEMV
PTYAIDYGNVATVSYVYKKDDIMIYPDQIKLKIALDDGSIVGIESAKYLVSHTNNRNIPKAKVSLEEARKKVGKRLKIKS
SRLAIIPTETNKEKLCYEFTGDYNGETFIVYVNAHTGYEERIIQIINAPNGQLTI
>Mature_455_residues
MKKSNKRVIYTAIVTIIVVFSSTFAILMTLERTDYRNYLQAQYSKNMYELMDSVQNIRVNLSKAAVVGSREQNIIVFDEI
FRHATNANDRLHSLPLSQDTIENTSRFLSQVGDFCYTLGKTTSEGTQLQDKDYKNIEDLKNRSVKLEANLNQVSNDINEG
KVRWGEIRKKVGGVLARNKEDISEQFKGIQKQVTQYPALIYDGPFSDNVVEIEPRINKEKEISKEEAEKKIRTVIGENKV
TKIDLVNKESNTGISTYSFEVGVKGRNDKSDRIVCEVSKKGGKILYLLDNRLVESSKIKRDTAMKKGEEFLKSIGYKEMV
PTYAIDYGNVATVSYVYKKDDIMIYPDQIKLKIALDDGSIVGIESAKYLVSHTNNRNIPKAKVSLEEARKKVGKRLKIKS
SRLAIIPTETNKEKLCYEFTGDYNGETFIVYVNAHTGYEERIIQIINAPNGQLTI

Specific function: Required for spore cortex hydrolysis during germination. Appears to be required for either expression, localization, activation or function of sleB [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ypeB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014239 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51746; Mature: 51746

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSNKRVIYTAIVTIIVVFSSTFAILMTLERTDYRNYLQAQYSKNMYELMDSVQNIRVN
CCCCCCEEHHHHHHHHHHHHHCCEEEEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHEEE
LSKAAVVGSREQNIIVFDEIFRHATNANDRLHSLPLSQDTIENTSRFLSQVGDFCYTLGK
EEHHEEECCCCCCEEEHHHHHHHHCCCCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHCC
TTSEGTQLQDKDYKNIEDLKNRSVKLEANLNQVSNDINEGKVRWGEIRKKVGGVLARNKE
CCCCCCCCCCCCCCCHHHHCCCCEEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHH
DISEQFKGIQKQVTQYPALIYDGPFSDNVVEIEPRINKEKEISKEEAEKKIRTVIGENKV
HHHHHHHHHHHHHHHCCEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCE
TKIDLVNKESNTGISTYSFEVGVKGRNDKSDRIVCEVSKKGGKILYLLDNRLVESSKIKR
EEEEEECCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHH
DTAMKKGEEFLKSIGYKEMVPTYAIDYGNVATVSYVYKKDDIMIYPDQIKLKIALDDGSI
HHHHHHHHHHHHHCCHHHCCCCEEECCCCEEEEEEEEECCCEEEECCCEEEEEEECCCCE
VGIESAKYLVSHTNNRNIPKAKVSLEEARKKVGKRLKIKSSRLAIIPTETNKEKLCYEFT
EEECCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCCCEEEEEEC
GDYNGETFIVYVNAHTGYEERIIQIINAPNGQLTI
CCCCCCEEEEEEECCCCHHHHHHHEEECCCCCEEC
>Mature Secondary Structure
MKKSNKRVIYTAIVTIIVVFSSTFAILMTLERTDYRNYLQAQYSKNMYELMDSVQNIRVN
CCCCCCEEHHHHHHHHHHHHHCCEEEEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHEEE
LSKAAVVGSREQNIIVFDEIFRHATNANDRLHSLPLSQDTIENTSRFLSQVGDFCYTLGK
EEHHEEECCCCCCEEEHHHHHHHHCCCCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHCC
TTSEGTQLQDKDYKNIEDLKNRSVKLEANLNQVSNDINEGKVRWGEIRKKVGGVLARNKE
CCCCCCCCCCCCCCCHHHHCCCCEEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHH
DISEQFKGIQKQVTQYPALIYDGPFSDNVVEIEPRINKEKEISKEEAEKKIRTVIGENKV
HHHHHHHHHHHHHHHCCEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCE
TKIDLVNKESNTGISTYSFEVGVKGRNDKSDRIVCEVSKKGGKILYLLDNRLVESSKIKR
EEEEEECCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCHHHHHHHHH
DTAMKKGEEFLKSIGYKEMVPTYAIDYGNVATVSYVYKKDDIMIYPDQIKLKIALDDGSI
HHHHHHHHHHHHHCCHHHCCCCEEECCCCEEEEEEEEECCCEEEECCCEEEEEEECCCCE
VGIESAKYLVSHTNNRNIPKAKVSLEEARKKVGKRLKIKSSRLAIIPTETNKEKLCYEFT
EEECCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCCCEEEEEEC
GDYNGETFIVYVNAHTGYEERIIQIINAPNGQLTI
CCCCCCEEEEEEECCCCHHHHHHHEEECCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377; 8830707; 3145906; 10658652; 12177332 [H]