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The map label for this gene is spoIIR [H]

Identifier: 28210050

GI number: 28210050

Start: 272403

End: 273059

Strand: Direct

Name: spoIIR [H]

Synonym: CTC00288

Alternate gene names: 28210050

Gene position: 272403-273059 (Clockwise)

Preceding gene: 28210049

Following gene: 28210052

Centisome position: 9.73

GC content: 23.14

Gene sequence:

>657_bases
ATGTGTAAGGGGGATTATAAATTGAAAAATAAACTATTTGCTATTATTACTATTTTTATATTTATATTTTTTATATCTTT
GAATTTAGGACAACCTCAGAAATTTCCTAAAAAAAATAATAATTTGAATGAAAAATTAATAAGATTTCATGTACTAGCTA
ATAGCGACTTAGAAGAAGATCAAAAACTAAAAATGGAAGTTAAAAACTCAGTACTTGAATATATTTATCCTAAATTATCA
AACAGTAACAATATAAATGAATCTAGAAGAATTTTAATGGAAAATACTAAAGGTATAGAAAATATAGCTAAAGATGTTAT
TTCTAAAAAAGGATATAATTACGATTTAAAATTAGAATTAACTCATGATAATTTTCCTATAAAAACATATGGAAATATAA
CTCTCCCACAAGGTAATTATGAAGCTTTTAGAATAATAATTGGAGAAGGTAAAGGCAAGAATTGGTGGTGTGTTATGTTT
CCACCACTATGCTTTGTAGATGTAACTAAAGGAGAAGTTGCATATGAGGAAACTGAAAGAGTTATGAAAACTTACTTAGA
AGAAAAAGAAGATATTATAGAAGATGATATAATAGATAATGATAAAATAGAGTTTAAATTTAAAATAGTTGAAGTTATAA
AAGATATATTTAAATAA

Upstream 100 bases:

>100_bases
AATGTAAAGACATATATAAGAAGAATAGGGGCTATAAAATAAAAAGTGAAATGAATATAATTAAAATTAATGGTAATAAT
AACAAATAGTTCAATATAAG

Downstream 100 bases:

>100_bases
GAAAAATCCAGAAATTAATCTGGATTTTTTTCATTTAAATATATTTCTTCAATATTGATTTTGTAATCAGATATTAGTTT
TAAAATAAGATTATAAATAT

Product: stage II sporulation protein R

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MCKGDYKLKNKLFAIITIFIFIFFISLNLGQPQKFPKKNNNLNEKLIRFHVLANSDLEEDQKLKMEVKNSVLEYIYPKLS
NSNNINESRRILMENTKGIENIAKDVISKKGYNYDLKLELTHDNFPIKTYGNITLPQGNYEAFRIIIGEGKGKNWWCVMF
PPLCFVDVTKGEVAYEETERVMKTYLEEKEDIIEDDIIDNDKIEFKFKIVEVIKDIFK

Sequences:

>Translated_218_residues
MCKGDYKLKNKLFAIITIFIFIFFISLNLGQPQKFPKKNNNLNEKLIRFHVLANSDLEEDQKLKMEVKNSVLEYIYPKLS
NSNNINESRRILMENTKGIENIAKDVISKKGYNYDLKLELTHDNFPIKTYGNITLPQGNYEAFRIIIGEGKGKNWWCVMF
PPLCFVDVTKGEVAYEETERVMKTYLEEKEDIIEDDIIDNDKIEFKFKIVEVIKDIFK
>Mature_218_residues
MCKGDYKLKNKLFAIITIFIFIFFISLNLGQPQKFPKKNNNLNEKLIRFHVLANSDLEEDQKLKMEVKNSVLEYIYPKLS
NSNNINESRRILMENTKGIENIAKDVISKKGYNYDLKLELTHDNFPIKTYGNITLPQGNYEAFRIIIGEGKGKNWWCVMF
PPLCFVDVTKGEVAYEETERVMKTYLEEKEDIIEDDIIDNDKIEFKFKIVEVIKDIFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014202 [H]

Pfam domain/function: PF09551 Spore_II_R [H]

EC number: NA

Molecular weight: Translated: 25625; Mature: 25625

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKGDYKLKNKLFAIITIFIFIFFISLNLGQPQKFPKKNNNLNEKLIRFHVLANSDLEED
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHEEEEEEECCCCCHH
QKLKMEVKNSVLEYIYPKLSNSNNINESRRILMENTKGIENIAKDVISKKGYNYDLKLEL
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEE
THDNFPIKTYGNITLPQGNYEAFRIIIGEGKGKNWWCVMFPPLCFVDVTKGEVAYEETER
ECCCCCEEECCCEECCCCCCEEEEEEEECCCCCEEEEEEECCEEEEECCCCCHHHHHHHH
VMKTYLEEKEDIIEDDIIDNDKIEFKFKIVEVIKDIFK
HHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHC
>Mature Secondary Structure
MCKGDYKLKNKLFAIITIFIFIFFISLNLGQPQKFPKKNNNLNEKLIRFHVLANSDLEED
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHEEEEEEECCCCCHH
QKLKMEVKNSVLEYIYPKLSNSNNINESRRILMENTKGIENIAKDVISKKGYNYDLKLEL
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEE
THDNFPIKTYGNITLPQGNYEAFRIIIGEGKGKNWWCVMFPPLCFVDVTKGEVAYEETER
ECCCCCEEECCCEECCCCCCEEEEEEEECCCCCEEEEEEECCEEEEECCCCCHHHHHHHH
VMKTYLEEKEDIIEDDIIDNDKIEFKFKIVEVIKDIFK
HHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]