| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is yabG [H]
Identifier: 28210042
GI number: 28210042
Start: 260440
End: 261342
Strand: Direct
Name: yabG [H]
Synonym: CTC00279
Alternate gene names: 28210042
Gene position: 260440-261342 (Clockwise)
Preceding gene: 28210041
Following gene: 28210043
Centisome position: 9.3
GC content: 32.0
Gene sequence:
>903_bases TTGGGATGTGCGTATATGAATATAGGGGACATAGTTGCAAGAAAATCTTATGGTAAAGATATAACTTTTAAAATAATAGA TATACAGAAGAGTAAAAAAGGAAAACTATATAAACTAAAAGGCGTAAATCTAAGAATTATAGCAGACTCATTAGGAAATG ATTTAGAACTAGTTAAAGAAGAGAATACTAAGTATGAAAAAGTATTTGACGAAAGAATAAATACTTCAATAAAAAATATT CTGATGAATAGAGGTGAAGAAATTAGTACCTCAAAATATACCAGATCCTCGGATAAGGAAATAAGGGTTACAAGGGGAAA AAAAAATAATGGATTAGCTTTTGGAAGGCCAGGTAAGATATTGCACGTGGACGGAGATGCAGAGTATTTAGATGTATGTA TGAAAGTATATAAGCAGTTAGAACTAGATGTAGTTGGGGCTATTATAGCTGAAAAGGAACAACCTGAGAAAGTTTTGCAG ATGGTAAAGGAAGTTAAGCCCGATATTGTTATAATAACAGGCCACGATGCAATATTAAAAAATACAACAAATTATATGGA CTTAAATAACTATAGGAATTCTAAGTACTTTATAAGAACTGTAAATGAACTTAGAAATTATGAACCAGGATATGATAACT TAGTTATATTTGCTGGTGCATGTCAATCTTATTATGAGGCCATATTAGACGCAGGTGCTAATTTTGCTAGTGCACCTAAT AGAGTGCTTATACATTGCTTGGACCCAGTGTTCCTATGTGAGAAAATAGCATATAGCAATATAGGAAAAGTTGTATCCAT TCAAGAGGCATTAGAAAATACAATAACAGGAGCCAATGGAATAGGGGGACTTCAAACAAGAGGTAAATATAGAGAAGGGT TTCCAAAATCATTGTATTCTTAA
Upstream 100 bases:
>100_bases TATATAATATTATAATTTAAGGTTGCTATTCATTAAGCAAAATAGCAATCTTTTTGTATCATCCTATATTTTTATTCATA TTATAGAATTAAAATAATAT
Downstream 100 bases:
>100_bases AATGAAATTCCCAGAGGAAATATGCTTTGGGAATTTAACTTTTGAACCAAAGTATATATGAATAAGAAAAATTTGAATAA ATAACCTTCCATTAGGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MGCAYMNIGDIVARKSYGKDITFKIIDIQKSKKGKLYKLKGVNLRIIADSLGNDLELVKEENTKYEKVFDERINTSIKNI LMNRGEEISTSKYTRSSDKEIRVTRGKKNNGLAFGRPGKILHVDGDAEYLDVCMKVYKQLELDVVGAIIAEKEQPEKVLQ MVKEVKPDIVIITGHDAILKNTTNYMDLNNYRNSKYFIRTVNELRNYEPGYDNLVIFAGACQSYYEAILDAGANFASAPN RVLIHCLDPVFLCEKIAYSNIGKVVSIQEALENTITGANGIGGLQTRGKYREGFPKSLYS
Sequences:
>Translated_300_residues MGCAYMNIGDIVARKSYGKDITFKIIDIQKSKKGKLYKLKGVNLRIIADSLGNDLELVKEENTKYEKVFDERINTSIKNI LMNRGEEISTSKYTRSSDKEIRVTRGKKNNGLAFGRPGKILHVDGDAEYLDVCMKVYKQLELDVVGAIIAEKEQPEKVLQ MVKEVKPDIVIITGHDAILKNTTNYMDLNNYRNSKYFIRTVNELRNYEPGYDNLVIFAGACQSYYEAILDAGANFASAPN RVLIHCLDPVFLCEKIAYSNIGKVVSIQEALENTITGANGIGGLQTRGKYREGFPKSLYS >Mature_299_residues GCAYMNIGDIVARKSYGKDITFKIIDIQKSKKGKLYKLKGVNLRIIADSLGNDLELVKEENTKYEKVFDERINTSIKNIL MNRGEEISTSKYTRSSDKEIRVTRGKKNNGLAFGRPGKILHVDGDAEYLDVCMKVYKQLELDVVGAIIAEKEQPEKVLQM VKEVKPDIVIITGHDAILKNTTNYMDLNNYRNSKYFIRTVNELRNYEPGYDNLVIFAGACQSYYEAILDAGANFASAPNR VLIHCLDPVFLCEKIAYSNIGKVVSIQEALENTITGANGIGGLQTRGKYREGFPKSLYS
Specific function: Cleaves the spore coat proteins spoIVA and safA. May cooperate with tgl to mediate the temperature-dependent cross- linking of coat proteins like gerQ [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Forespore outer membrane. Note=Synthesized in the mother cell compartment and assembled on the surface of the forespore [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase U57 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008764 - ProDom: PD127708 [H]
Pfam domain/function: PF05582 Peptidase_U57 [H]
EC number: NA
Molecular weight: Translated: 33720; Mature: 33589
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCAYMNIGDIVARKSYGKDITFKIIDIQKSKKGKLYKLKGVNLRIIADSLGNDLELVKE CCEEECCHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEECCEEEEEECCCCCCHHHHHC ENTKYEKVFDERINTSIKNILMNRGEEISTSKYTRSSDKEIRVTRGKKNNGLAFGRPGKI CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCE LHVDGDAEYLDVCMKVYKQLELDVVGAIIAEKEQPEKVLQMVKEVKPDIVIITGHDAILK EEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCHHHH NTTNYMDLNNYRNSKYFIRTVNELRNYEPGYDNLVIFAGACQSYYEAILDAGANFASAPN CCCCCEECCCCCCCHHHEEEHHHHHCCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCCC RVLIHCLDPVFLCEKIAYSNIGKVVSIQEALENTITGANGIGGLQTRGKYREGFPKSLYS EEEEEECCHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCHHCCCCHHHCC >Mature Secondary Structure GCAYMNIGDIVARKSYGKDITFKIIDIQKSKKGKLYKLKGVNLRIIADSLGNDLELVKE CEEECCHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEECCEEEEEECCCCCCHHHHHC ENTKYEKVFDERINTSIKNILMNRGEEISTSKYTRSSDKEIRVTRGKKNNGLAFGRPGKI CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCE LHVDGDAEYLDVCMKVYKQLELDVVGAIIAEKEQPEKVLQMVKEVKPDIVIITGHDAILK EEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCHHHH NTTNYMDLNNYRNSKYFIRTVNELRNYEPGYDNLVIFAGACQSYYEAILDAGANFASAPN CCCCCEECCCCCCCHHHEEEHHHHHCCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCCC RVLIHCLDPVFLCEKIAYSNIGKVVSIQEALENTITGANGIGGLQTRGKYREGFPKSLYS EEEEEECCHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]