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The map label for this gene is ycgE [C]

Identifier: 28199776

GI number: 28199776

Start: 2239693

End: 2240055

Strand: Reverse

Name: ycgE [C]

Synonym: PD1909

Alternate gene names: 28199776

Gene position: 2240055-2239693 (Counterclockwise)

Preceding gene: 28199777

Following gene: 28199774

Centisome position: 88.9

GC content: 53.17

Gene sequence:

>363_bases
ATGCCTATGTTGGATCCAGGCAGTAACCGAGAACTACCAACGATTCCAGCCAAGCGTTACTTCTCCATTGGTGAAGTTGC
TGATTTGTGCGACGTCAAACAGCACGTATTGCGCTACTGGGAAACCGAATTCCCCAGTCTGGAACCAGCCAAACGCCGTG
GCAACCGTCGTTACTACCAGCGCCACGATGTCCTGTTAGTGCGTCAAATTCGCAGCCTGTTGTATGAACAGGGATACACC
ATCGGTGGTGCACGCTTGCGCCTGGAGGGTGAGAGCGCCCGTAACGAATTGACCCTCAGCCATCAGATTATCAAGCAAGT
GCGCCTGGAACTGGAGGAAGTGTTGCAGTTATTGCGGAGCTGA

Upstream 100 bases:

>100_bases
CAGAGACCTGGCCGCAATCCAAAAACCGGAGAAGAAATCCCGATTTCTGCCAGAACAGTGGTTACTTTCCGATCGGGTCA
GAAGCTGAAGGAGAGGGTGG

Downstream 100 bases:

>100_bases
GTGCTTTGAACTGCTCCTCTTATCAATCTCCCCGCGTTTCTGGAATGCTACGTAGATGCTAGGCAGTATTGAGGTAATAC
CGCTATACGGTACAATCATG

Product: transcription regulator protein

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcription Regulator Protein; Regulatory Protein MerR; Transcriptional Regulator Merr Family; MerR-Family Transcriptional Regulator; Transcriptional Regulator Protein; MerR Family Regulatory Protein; Transcriptional Regulator MerR; TRANSCRIPTIONal REGULATOR MerR Family; Transcriptional Regulatory Protein; MerR Family Regulatory Family; Trancriptional Regulator MerR Family; Transcriptional Regulator Protein MerR Family; Bacterial Transferase Hexapeptide Repeat Protein; Transcriptional Regulator Domain-Containing Protein; MerR Protein

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MPMLDPGSNRELPTIPAKRYFSIGEVADLCDVKQHVLRYWETEFPSLEPAKRRGNRRYYQRHDVLLVRQIRSLLYEQGYT
IGGARLRLEGESARNELTLSHQIIKQVRLELEEVLQLLRS

Sequences:

>Translated_120_residues
MPMLDPGSNRELPTIPAKRYFSIGEVADLCDVKQHVLRYWETEFPSLEPAKRRGNRRYYQRHDVLLVRQIRSLLYEQGYT
IGGARLRLEGESARNELTLSHQIIKQVRLELEEVLQLLRS
>Mature_119_residues
PMLDPGSNRELPTIPAKRYFSIGEVADLCDVKQHVLRYWETEFPSLEPAKRRGNRRYYQRHDVLLVRQIRSLLYEQGYTI
GGARLRLEGESARNELTLSHQIIKQVRLELEEVLQLLRS

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14121; Mature: 13989

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMLDPGSNRELPTIPAKRYFSIGEVADLCDVKQHVLRYWETEFPSLEPAKRRGNRRYYQ
CCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHH
RHDVLLVRQIRSLLYEQGYTIGGARLRLEGESARNELTLSHQIIKQVRLELEEVLQLLRS
HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
PMLDPGSNRELPTIPAKRYFSIGEVADLCDVKQHVLRYWETEFPSLEPAKRRGNRRYYQ
CCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHH
RHDVLLVRQIRSLLYEQGYTIGGARLRLEGESARNELTLSHQIIKQVRLELEEVLQLLRS
HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA