Definition Xylella fastidiosa Temecula1, complete genome.
Accession NC_004556
Length 2,519,802

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The map label for this gene is 28199764

Identifier: 28199764

GI number: 28199764

Start: 2222825

End: 2223742

Strand: Reverse

Name: 28199764

Synonym: PD1896

Alternate gene names: NA

Gene position: 2223742-2222825 (Counterclockwise)

Preceding gene: 28199765

Following gene: 28199755

Centisome position: 88.25

GC content: 55.45

Gene sequence:

>918_bases
GTGGTCGCAGTGCTTTTCACGTTTTTCGCGTGGTGGCAGCGTGATCGCGATGTTGCCGGAACGCCGTTTGTCAGCATACG
TGGGATATTCCAGGCCGATCATCGGGCTTGGTGTGAGCATCGGCGGCGTGAGCTGACTAAGCCTGATGGATGGATGAGTC
TGATTGGTTTGCATTGGTTGGGGCCGAAGGCACATTACGTTGGTAGCAGTCCCGACAATGGCATTCGCCTAGCGATGGGG
CCGCCTGACATGGGGATGATTGAGCGCGATGGTGATGTTGTTTGGTTCACTCCACACGCCGGAGTGCCGCTGACTGTCGA
TGGGCATCCGTTGCGTGGTCGTGTCCGTGTCTTCAGTGATGCTGATCTTGCGCCAACCACGATTGGTTTTGATGGTGGCA
AGGGATGGTTGATGCTGATTCGGCGTGGGGATCGGTTGGCACTCAGGGTCAGGCACGCGGATGCACCGTCACGGTTGCAC
TTTACTGGGTTGGAGTATTGGCCGTCTGATCCAGAGTGGCGGATTTCAGCGCGCTATCTGCCCAATAAGGTTGGCGCTAC
GTTATCCATTTTTAACATTGTTGGGATGACTGCCAATGTGCCTAATGCGGGTGTCATTGCGTTCGAGCGTTTGGGCCGCA
CCTATCATCTGCAGGCGATACGTGCGGCTGGGAAAGCACTGTTTGTGATGTTTGCTGACCGTACCAGTGGTCACGGGAGC
TATCCTGCCGGGCGCTTCTTGGAGGTGGATCCACCGGATAAACAGGGGCGTGTAGTGTTGGATTTCAATCGTGCTTACAA
CCCACCGTGTGCATTTACATTGTTTACCACCTGTTTACTCCCGCCCTCTGAGAATCGATTGAATCTGGCGGTGACCGCCG
GTGAGAAGGCTTACCATGTGTCGAGAGTGTCGCCATGA

Upstream 100 bases:

>100_bases
CCTGGGCGCGTTTTAGTTTGGCTGAGATCGATCGTTGGTTTCTTAGGGGGCGGTGATGCGGCGTGAATACCAATACGGGG
CAGTATTGATATTGTTGGCT

Downstream 100 bases:

>100_bases
ATGCAGGGGCGTTGTATTTGAGTGTTTGAGACCTCTATTGGGTCTTGGTCGATTCTGTCCCAGGCTGGGTGAAGGGGCAA
GTCCTCATCTGCCACCGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MVAVLFTFFAWWQRDRDVAGTPFVSIRGIFQADHRAWCEHRRRELTKPDGWMSLIGLHWLGPKAHYVGSSPDNGIRLAMG
PPDMGMIERDGDVVWFTPHAGVPLTVDGHPLRGRVRVFSDADLAPTTIGFDGGKGWLMLIRRGDRLALRVRHADAPSRLH
FTGLEYWPSDPEWRISARYLPNKVGATLSIFNIVGMTANVPNAGVIAFERLGRTYHLQAIRAAGKALFVMFADRTSGHGS
YPAGRFLEVDPPDKQGRVVLDFNRAYNPPCAFTLFTTCLLPPSENRLNLAVTAGEKAYHVSRVSP

Sequences:

>Translated_305_residues
MVAVLFTFFAWWQRDRDVAGTPFVSIRGIFQADHRAWCEHRRRELTKPDGWMSLIGLHWLGPKAHYVGSSPDNGIRLAMG
PPDMGMIERDGDVVWFTPHAGVPLTVDGHPLRGRVRVFSDADLAPTTIGFDGGKGWLMLIRRGDRLALRVRHADAPSRLH
FTGLEYWPSDPEWRISARYLPNKVGATLSIFNIVGMTANVPNAGVIAFERLGRTYHLQAIRAAGKALFVMFADRTSGHGS
YPAGRFLEVDPPDKQGRVVLDFNRAYNPPCAFTLFTTCLLPPSENRLNLAVTAGEKAYHVSRVSP
>Mature_305_residues
MVAVLFTFFAWWQRDRDVAGTPFVSIRGIFQADHRAWCEHRRRELTKPDGWMSLIGLHWLGPKAHYVGSSPDNGIRLAMG
PPDMGMIERDGDVVWFTPHAGVPLTVDGHPLRGRVRVFSDADLAPTTIGFDGGKGWLMLIRRGDRLALRVRHADAPSRLH
FTGLEYWPSDPEWRISARYLPNKVGATLSIFNIVGMTANVPNAGVIAFERLGRTYHLQAIRAAGKALFVMFADRTSGHGS
YPAGRFLEVDPPDKQGRVVLDFNRAYNPPCAFTLFTTCLLPPSENRLNLAVTAGEKAYHVSRVSP

Specific function: Unknown

COG id: COG3358

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34000; Mature: 34000

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAVLFTFFAWWQRDRDVAGTPFVSIRGIFQADHRAWCEHRRRELTKPDGWMSLIGLHWL
CEEEEEEHHHHHHCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEEEEEC
GPKAHYVGSSPDNGIRLAMGPPDMGMIERDGDVVWFTPHAGVPLTVDGHPLRGRVRVFSD
CCCEEECCCCCCCCEEEEECCCCCCEEECCCCEEEECCCCCCEEEECCCCCCCEEEEEEC
ADLAPTTIGFDGGKGWLMLIRRGDRLALRVRHADAPSRLHFTGLEYWPSDPEWRISARYL
CCCCCEEEEECCCCEEEEEEEECCEEEEEEEECCCCCEEEEEEEEECCCCCCEEEEEEEC
PNKVGATLSIFNIVGMTANVPNAGVIAFERLGRTYHLQAIRAAGKALFVMFADRTSGHGS
CCHHCCEEEEEEEEEEECCCCCCCCHHHHHCCCEEEEHHHHHCCEEEEEEEECCCCCCCC
YPAGRFLEVDPPDKQGRVVLDFNRAYNPPCAFTLFTTCLLPPSENRLNLAVTAGEKAYHV
CCCCCEEECCCCCCCCCEEEEECCCCCCCCHHEEHHHHCCCCCCCCEEEEEECCCCEEEE
SRVSP
ECCCC
>Mature Secondary Structure
MVAVLFTFFAWWQRDRDVAGTPFVSIRGIFQADHRAWCEHRRRELTKPDGWMSLIGLHWL
CEEEEEEHHHHHHCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEEEEEC
GPKAHYVGSSPDNGIRLAMGPPDMGMIERDGDVVWFTPHAGVPLTVDGHPLRGRVRVFSD
CCCEEECCCCCCCCEEEEECCCCCCEEECCCCEEEECCCCCCEEEECCCCCCCEEEEEEC
ADLAPTTIGFDGGKGWLMLIRRGDRLALRVRHADAPSRLHFTGLEYWPSDPEWRISARYL
CCCCCEEEEECCCCEEEEEEEECCEEEEEEEECCCCCEEEEEEEEECCCCCCEEEEEEEC
PNKVGATLSIFNIVGMTANVPNAGVIAFERLGRTYHLQAIRAAGKALFVMFADRTSGHGS
CCHHCCEEEEEEEEEEECCCCCCCCHHHHHCCCEEEEHHHHHCCEEEEEEEECCCCCCCC
YPAGRFLEVDPPDKQGRVVLDFNRAYNPPCAFTLFTTCLLPPSENRLNLAVTAGEKAYHV
CCCCCEEECCCCCCCCCEEEEECCCCCCCCHHEEHHHHCCCCCCCCEEEEEECCCCEEEE
SRVSP
ECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA