Definition Xylella fastidiosa Temecula1, complete genome.
Accession NC_004556
Length 2,519,802

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The map label for this gene is 28198854

Identifier: 28198854

GI number: 28198854

Start: 1158242

End: 1159147

Strand: Reverse

Name: 28198854

Synonym: PD0955

Alternate gene names: NA

Gene position: 1159147-1158242 (Counterclockwise)

Preceding gene: 28198855

Following gene: 28198853

Centisome position: 46.0

GC content: 45.47

Gene sequence:

>906_bases
ATGAGTCAGTTTCAGAAAAATCCGTTTTATTTTGGTAATACAGTTGTTTTTACCTTGCTTGTGTTGTTGTCCCTGGGAGT
CCAAGCAACGCCAAGGGATGAGGTAATAGTGAAATCAATTTCTAAAGAGGAGCAAAGTGCTGCTCTCAATTATTGGACGG
ATGAGCGGATTGAACAAACATTGGCACAAAATAAAGCCTATGATTTCAAACCAGATCGGGTTGATCCCGCTGGAGGTACC
GAGATGATGTCGACAGGGCGACTATTTTTTATTCGTAACGGTCGTAATTCGTTTTGTACTGCGAATGCTGTGGAATCGGC
GACGAAAAGCGTTATTGCTACTGCTGCACACTGTGCAAAGGTGCCAGCTACTCAGGCAGGACGTGTTAAAATCGAACATT
TGGTATTTTTAGCCCACTATCGTAAAGGGGAGTGGGCTGGACGTTTTCCTATACGTAATGTCTTTACGGTGGTCGGTTGG
GATGCACGTGAAGAAGATGGATTTGACTTTGCTTTTTTGAGTGCTGCATACGATAACTACGGAACTAAGGTCGGAAATCT
CGTTATGGCATCACCAATTCGATTCTTCGCCCCACCATTGCTCGGTAACTTCTATATGTATGGTTATCCAGGTGCGATCC
AAGGAGGCGAGTTTCCTTACAAATGCTCAACAGTACATCCCATTGAAAATCCAGTGCTCAGGCCAGGCCCGGAGTTGCGT
ATTGGTAGCAACTGTAGAGATTTTTCTGGTGGGACTTCGGGGGGGCCTGTGATGCAGACATTACCAGACGGAACATATCA
AACAGGAAATGTGAAATCCTACATATCAAGTTCTGGTTCGGTTGCATTTACTTATTGGGAGACTGCTGCTCATGGTGCTT
GGGATCGGGCCCAACACGACGAATAG

Upstream 100 bases:

>100_bases
TCGTAATTCGAAACAAAAAAGTCCTATTTCAATGATGAGAATAATACCTTGGCTATCGATTTATCGGCTTCTGTTATTTC
TATTGATCTCTGGAGGGTTT

Downstream 100 bases:

>100_bases
TTTTGTAGGATATACCACCAGCGGCAAGTACGTTTTGACTGTCTTTTCCCTCATATTCCCTCATATCTTTAGTAATCATG
TCGGAACGTGCTTGCTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: V8-Like Glu-Specific Endopeptidase

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MSQFQKNPFYFGNTVVFTLLVLLSLGVQATPRDEVIVKSISKEEQSAALNYWTDERIEQTLAQNKAYDFKPDRVDPAGGT
EMMSTGRLFFIRNGRNSFCTANAVESATKSVIATAAHCAKVPATQAGRVKIEHLVFLAHYRKGEWAGRFPIRNVFTVVGW
DAREEDGFDFAFLSAAYDNYGTKVGNLVMASPIRFFAPPLLGNFYMYGYPGAIQGGEFPYKCSTVHPIENPVLRPGPELR
IGSNCRDFSGGTSGGPVMQTLPDGTYQTGNVKSYISSSGSVAFTYWETAAHGAWDRAQHDE

Sequences:

>Translated_301_residues
MSQFQKNPFYFGNTVVFTLLVLLSLGVQATPRDEVIVKSISKEEQSAALNYWTDERIEQTLAQNKAYDFKPDRVDPAGGT
EMMSTGRLFFIRNGRNSFCTANAVESATKSVIATAAHCAKVPATQAGRVKIEHLVFLAHYRKGEWAGRFPIRNVFTVVGW
DAREEDGFDFAFLSAAYDNYGTKVGNLVMASPIRFFAPPLLGNFYMYGYPGAIQGGEFPYKCSTVHPIENPVLRPGPELR
IGSNCRDFSGGTSGGPVMQTLPDGTYQTGNVKSYISSSGSVAFTYWETAAHGAWDRAQHDE
>Mature_300_residues
SQFQKNPFYFGNTVVFTLLVLLSLGVQATPRDEVIVKSISKEEQSAALNYWTDERIEQTLAQNKAYDFKPDRVDPAGGTE
MMSTGRLFFIRNGRNSFCTANAVESATKSVIATAAHCAKVPATQAGRVKIEHLVFLAHYRKGEWAGRFPIRNVFTVVGWD
AREEDGFDFAFLSAAYDNYGTKVGNLVMASPIRFFAPPLLGNFYMYGYPGAIQGGEFPYKCSTVHPIENPVLRPGPELRI
GSNCRDFSGGTSGGPVMQTLPDGTYQTGNVKSYISSSGSVAFTYWETAAHGAWDRAQHDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33179; Mature: 33047

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQFQKNPFYFGNTVVFTLLVLLSLGVQATPRDEVIVKSISKEEQSAALNYWTDERIEQT
CCCCCCCCCEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LAQNKAYDFKPDRVDPAGGTEMMSTGRLFFIRNGRNSFCTANAVESATKSVIATAAHCAK
HHHCCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHH
VPATQAGRVKIEHLVFLAHYRKGEWAGRFPIRNVFTVVGWDAREEDGFDFAFLSAAYDNY
CCCCCCCCEEHHHEEEEEHHCCCCCCCCCCHHHEEEEECCCCCCCCCCCEEEHHHHHHHC
GTKVGNLVMASPIRFFAPPLLGNFYMYGYPGAIQGGEFPYKCSTVHPIENPVLRPGPELR
CCHHCCEEEECCHHHHCCHHHCCEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEE
IGSNCRDFSGGTSGGPVMQTLPDGTYQTGNVKSYISSSGSVAFTYWETAAHGAWDRAQHD
ECCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHCCCCCEEEEEECCHHCCCCCCCCCC
E
C
>Mature Secondary Structure 
SQFQKNPFYFGNTVVFTLLVLLSLGVQATPRDEVIVKSISKEEQSAALNYWTDERIEQT
CCCCCCCCEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LAQNKAYDFKPDRVDPAGGTEMMSTGRLFFIRNGRNSFCTANAVESATKSVIATAAHCAK
HHHCCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHH
VPATQAGRVKIEHLVFLAHYRKGEWAGRFPIRNVFTVVGWDAREEDGFDFAFLSAAYDNY
CCCCCCCCEEHHHEEEEEHHCCCCCCCCCCHHHEEEEECCCCCCCCCCCEEEHHHHHHHC
GTKVGNLVMASPIRFFAPPLLGNFYMYGYPGAIQGGEFPYKCSTVHPIENPVLRPGPELR
CCHHCCEEEECCHHHHCCHHHCCEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEE
IGSNCRDFSGGTSGGPVMQTLPDGTYQTGNVKSYISSSGSVAFTYWETAAHGAWDRAQHD
ECCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHCCCCCEEEEEECCHHCCCCCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA