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The map label for this gene is 28198853

Identifier: 28198853

GI number: 28198853

Start: 1157184

End: 1157516

Strand: Reverse

Name: 28198853

Synonym: PD0954

Alternate gene names: NA

Gene position: 1157516-1157184 (Counterclockwise)

Preceding gene: 28198854

Following gene: 28198852

Centisome position: 45.94

GC content: 51.95

Gene sequence:

>333_bases
ATGTACCACTACACCGAATCAGGCCTAGGTAATGTGTGGTTACGCAACGGGTTTACGGTGCACAAGACACCCTATGGTGA
CGGCATTGCTATTGATAATTTACCAAGTCTTCATAGAAGCCTTTCCCTAGCGCTGGCGCTAAAACCGGCCACCCTTTCAG
GTTCCGAAATCCGTTTTATGAGAAAGGAACTCGAGCTATCGCAGCCCGAGTTCGCGGCTCGTCTGGGTACGAATGTTCAG
ACGGTTGCGGCCTGGGAAGAGGGGAGGGCGGCGCTTCCAGATGCCGCAGACAAAATGATCCGCGTTCTAATCAATGCGCA
TTACAAAAGGTGA

Upstream 100 bases:

>100_bases
GCGAGCGCTATTTCTGCGAAAGGTCCGCGCGATGCGGAGTTATATGGGGTTGCCTTAGTGATTCAGTTAACTAGAAAAAA
CAAGGGAAAATAAAGCCAAC

Downstream 100 bases:

>100_bases
TGGGTGGATCGGTTAACCCCAAACCCCACGGGGGGAATCCAAAGGCGTTTCCACTCCGCAATTTCTCATTTCCATCAAAA
ATCCCCTGAAAATAACAATT

Product: hypothetical protein

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Hypothethical Protein; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MYHYTESGLGNVWLRNGFTVHKTPYGDGIAIDNLPSLHRSLSLALALKPATLSGSEIRFMRKELELSQPEFAARLGTNVQ
TVAAWEEGRAALPDAADKMIRVLINAHYKR

Sequences:

>Translated_110_residues
MYHYTESGLGNVWLRNGFTVHKTPYGDGIAIDNLPSLHRSLSLALALKPATLSGSEIRFMRKELELSQPEFAARLGTNVQ
TVAAWEEGRAALPDAADKMIRVLINAHYKR
>Mature_110_residues
MYHYTESGLGNVWLRNGFTVHKTPYGDGIAIDNLPSLHRSLSLALALKPATLSGSEIRFMRKELELSQPEFAARLGTNVQ
TVAAWEEGRAALPDAADKMIRVLINAHYKR

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12236; Mature: 12236

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYHYTESGLGNVWLRNGFTVHKTPYGDGIAIDNLPSLHRSLSLALALKPATLSGSEIRFM
CCCCCCCCCCCEEECCCEEEECCCCCCCEEECCCHHHHHHHEEEEEECCCCCCCHHHHHH
RKELELSQPEFAARLGTNVQTVAAWEEGRAALPDAADKMIRVLINAHYKR
HHHHCCCCCHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYHYTESGLGNVWLRNGFTVHKTPYGDGIAIDNLPSLHRSLSLALALKPATLSGSEIRFM
CCCCCCCCCCCEEECCCEEEECCCCCCCEEECCCHHHHHHHEEEEEECCCCCCCHHHHHH
RKELELSQPEFAARLGTNVQTVAAWEEGRAALPDAADKMIRVLINAHYKR
HHHHCCCCCHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA