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The map label for this gene is 28198781

Identifier: 28198781

GI number: 28198781

Start: 1090710

End: 1091315

Strand: Reverse

Name: 28198781

Synonym: PD0879

Alternate gene names: NA

Gene position: 1091315-1090710 (Counterclockwise)

Preceding gene: 28198782

Following gene: 28198779

Centisome position: 43.31

GC content: 51.65

Gene sequence:

>606_bases
GTGCTAAGTGTTTCTCCCCTATTGCAATCTCCCAGTAGTGCTTCAATGCGTTTCCTTTCACTAGATGCTTATGGCCGTGT
ACTCGACTGGATCAGTTGGCAAGACGCTGCTTGTTTGTACGTGCGCAATGCTGTGTCTTGGACTCTTGGGGATCCATGCC
TGTCAATCCACGGTGGCATTTCGCGTTTGACTGGTAAACGCAGCGTGATCGCGTTGCATCCAATCATTGCTTCACGCGGT
CACGCACGTACGTACGTACCGGTTCCAACCCCAGCACTGACCAACCAAGCCCTGTTCGCCCGTGATGACCATCTATGCCT
GTATTGCGGTCAGCAATTCAGCAGGTTCCAGCTGACGCGCGACCACGTTATTCCGATTTCCAAAGGTGGCTTAGATACAT
GGGAAAACGTGGTCACCGCCTGCTTTCATTGTAATTCACTCAAAGCTAACCGTACCCCACAGCAAGCAGGTATGCGATTA
TTGGCAGTGCCATACCGCCCGAGCTGGATCGAACACCTGATCTTGTCTAACCGTAATATTCTGGCCGACCAAATGGCCTT
TCTGAAGGCACAGTTACCCAAGCGTTCCAAGTTATCCCGCAACTAG

Upstream 100 bases:

>100_bases
ACATAAACTGCCACTAATCGAGTAGAAGCATAGTTCTCCTTATGCAGCCAGACATTCAGACTATACGCGCTGATCGACGC
AGAGCTTAACTATAGTTACT

Downstream 100 bases:

>100_bases
CAAGGCCGCAGTAACCGGATGGTCGGGTCCGTTTTCATGCTGGAGTATTTCAGCTTGACAAAGAGATACCAGCATTCAGA
AACAGCGATGGGATCCGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; Restriction Endonuclease; HNH Endonuclease Domain Protein; HNH Endonuclease Domain-Containing Protein; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Nuclease; Restriction Endonuclease McrA/HNH Family; Hnh Endonuclease Domain Protein

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MLSVSPLLQSPSSASMRFLSLDAYGRVLDWISWQDAACLYVRNAVSWTLGDPCLSIHGGISRLTGKRSVIALHPIIASRG
HARTYVPVPTPALTNQALFARDDHLCLYCGQQFSRFQLTRDHVIPISKGGLDTWENVVTACFHCNSLKANRTPQQAGMRL
LAVPYRPSWIEHLILSNRNILADQMAFLKAQLPKRSKLSRN

Sequences:

>Translated_201_residues
MLSVSPLLQSPSSASMRFLSLDAYGRVLDWISWQDAACLYVRNAVSWTLGDPCLSIHGGISRLTGKRSVIALHPIIASRG
HARTYVPVPTPALTNQALFARDDHLCLYCGQQFSRFQLTRDHVIPISKGGLDTWENVVTACFHCNSLKANRTPQQAGMRL
LAVPYRPSWIEHLILSNRNILADQMAFLKAQLPKRSKLSRN
>Mature_201_residues
MLSVSPLLQSPSSASMRFLSLDAYGRVLDWISWQDAACLYVRNAVSWTLGDPCLSIHGGISRLTGKRSVIALHPIIASRG
HARTYVPVPTPALTNQALFARDDHLCLYCGQQFSRFQLTRDHVIPISKGGLDTWENVVTACFHCNSLKANRTPQQAGMRL
LAVPYRPSWIEHLILSNRNILADQMAFLKAQLPKRSKLSRN

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22452; Mature: 22452

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSVSPLLQSPSSASMRFLSLDAYGRVLDWISWQDAACLYVRNAVSWTLGDPCLSIHGGI
CCCCCCHHCCCCCCCEEEEEECHHHHHHHHCCCCCCEEEEEECCCEEECCCCCEECCCCH
SRLTGKRSVIALHPIIASRGHARTYVPVPTPALTNQALFARDDHLCLYCGQQFSRFQLTR
HHHCCCCEEEEEEHHHHCCCCCEEEECCCCCCCCCCEEEECCCCEEEEECCCCHHEEECC
DHVIPISKGGLDTWENVVTACFHCNSLKANRTPQQAGMRLLAVPYRPSWIEHLILSNRNI
CCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEECCCHHHHHHHHHCCCCH
LADQMAFLKAQLPKRSKLSRN
HHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLSVSPLLQSPSSASMRFLSLDAYGRVLDWISWQDAACLYVRNAVSWTLGDPCLSIHGGI
CCCCCCHHCCCCCCCEEEEEECHHHHHHHHCCCCCCEEEEEECCCEEECCCCCEECCCCH
SRLTGKRSVIALHPIIASRGHARTYVPVPTPALTNQALFARDDHLCLYCGQQFSRFQLTR
HHHCCCCEEEEEEHHHHCCCCCEEEECCCCCCCCCCEEEECCCCEEEEECCCCHHEEECC
DHVIPISKGGLDTWENVVTACFHCNSLKANRTPQQAGMRLLAVPYRPSWIEHLILSNRNI
CCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEECCCHHHHHHHHHCCCCH
LADQMAFLKAQLPKRSKLSRN
HHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA