| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28198671
Identifier: 28198671
GI number: 28198671
Start: 947386
End: 947676
Strand: Reverse
Name: 28198671
Synonym: PD0765
Alternate gene names: NA
Gene position: 947676-947386 (Counterclockwise)
Preceding gene: 28198678
Following gene: 28198670
Centisome position: 37.61
GC content: 54.64
Gene sequence:
>291_bases ATGCCCTGCTTCTTCAGATGGACGAAGAAGGAGACACGTTCTGCGTCGCCAAGCAGGTCACTATGGATACGAGACATGCC CCCAGCCGCTGGTTTATGTCTTTCCAGAAGTGAGGTGGCCGAGTTATGCGGTACCCCGCAACGCGCTCGCCAAGCCGCTT TTCTTAGGAAGAACGGCATTCGGCATTATCTGGATGCGTATGACTGGCCGGTCGTGCTGCGTGCTTCGATTGAAGAGATA CCGACGACTCCCATCGTTGCGCCTGTTTGGAAGTCTAATAAGGTCGCTTGA
Upstream 100 bases:
>100_bases GCGGCGTAACTCCAGACACGTGCACGCGTTGCCGTCGATCGCCCCACATGTGCAGGTGTATCCATATGGCTCGCCAGACA CGCAGCGCCGTAGCGGCGTG
Downstream 100 bases:
>100_bases TGGGACGTAAGCCAATCAAAGCAGGTGCGATTCCGAGGTTTCGCGTGCGCCCTCAGAAGTCCGGCGTGGTGTATTACTAC TACGATCATGGCGGCAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MPCFFRWTKKETRSASPSRSLWIRDMPPAAGLCLSRSEVAELCGTPQRARQAAFLRKNGIRHYLDAYDWPVVLRASIEEI PTTPIVAPVWKSNKVA
Sequences:
>Translated_96_residues MPCFFRWTKKETRSASPSRSLWIRDMPPAAGLCLSRSEVAELCGTPQRARQAAFLRKNGIRHYLDAYDWPVVLRASIEEI PTTPIVAPVWKSNKVA >Mature_95_residues PCFFRWTKKETRSASPSRSLWIRDMPPAAGLCLSRSEVAELCGTPQRARQAAFLRKNGIRHYLDAYDWPVVLRASIEEIP TTPIVAPVWKSNKVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10900; Mature: 10769
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCFFRWTKKETRSASPSRSLWIRDMPPAAGLCLSRSEVAELCGTPQRARQAAFLRKNGI CCCCCCCCCCHHCCCCCCCCEEEECCCCCCCHHCCHHHHHHHHCCHHHHHHHHHHHHCCH RHYLDAYDWPVVLRASIEEIPTTPIVAPVWKSNKVA HHHHHCCCCCCCEECCHHHCCCCCCEECCCCCCCCC >Mature Secondary Structure PCFFRWTKKETRSASPSRSLWIRDMPPAAGLCLSRSEVAELCGTPQRARQAAFLRKNGI CCCCCCCCCHHCCCCCCCCEEEECCCCCCCHHCCHHHHHHHHCCHHHHHHHHHHHHCCH RHYLDAYDWPVVLRASIEEIPTTPIVAPVWKSNKVA HHHHHCCCCCCCEECCHHHCCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA