| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28198233
Identifier: 28198233
GI number: 28198233
Start: 392558
End: 392878
Strand: Reverse
Name: 28198233
Synonym: PD0312
Alternate gene names: NA
Gene position: 392878-392558 (Counterclockwise)
Preceding gene: 28198235
Following gene: 28198232
Centisome position: 15.59
GC content: 57.32
Gene sequence:
>321_bases ATGAGCATCAACAAACTACTGATCGCACTGGCGATGGGTGCGACCCTTGCTGCGTGCGGCTCAAACACACCAGAAAAGCC ACCGACCCAGGATCCTAATCCTCCTAGTAATCCTGCAGCCAATGAGGCTCAAGCAGCCGCCGATCAGGCGGCTGCCAATC CACCTGCTGACGCAACCCCAGCTGCCGCCGATACTGCAGCTGCTGCTGCCAACACAGCAGCTGATGCCGCTGCAACCACA ACTCCTCCAGCAGATGCTGCCAAGCAATCTGGAGCAGCTCCTGCCAACAAGGCGAAAAACCCTGCAGAACAGAAGAAGTA A
Upstream 100 bases:
>100_bases GAAACTGAATGCGCATATACTTGACACCCGAATCTTGGTCGTCATCATGTTGGGCGCGCGCATCTTGCGCGTTGCCTAAC TAACGACGAGGATTGAACGA
Downstream 100 bases:
>100_bases TCCTTCTTCAGTACTTCATGTGTTCGGAAAAGCCGCTGGTTTGCCAGCGGCTTTTCCTTTGCTTAGCAGTGACCGTATAC AACCATGAGTCTTTGCCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSINKLLIALAMGATLAACGSNTPEKPPTQDPNPPSNPAANEAQAAADQAAANPPADATPAAADTAAAAANTAADAAATT TPPADAAKQSGAAPANKAKNPAEQKK
Sequences:
>Translated_106_residues MSINKLLIALAMGATLAACGSNTPEKPPTQDPNPPSNPAANEAQAAADQAAANPPADATPAAADTAAAAANTAADAAATT TPPADAAKQSGAAPANKAKNPAEQKK >Mature_105_residues SINKLLIALAMGATLAACGSNTPEKPPTQDPNPPSNPAANEAQAAADQAAANPPADATPAAADTAAAAANTAADAAATTT PPADAAKQSGAAPANKAKNPAEQKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10124; Mature: 9993
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINKLLIALAMGATLAACGSNTPEKPPTQDPNPPSNPAANEAQAAADQAAANPPADATP CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC AAADTAAAAANTAADAAATTTPPADAAKQSGAAPANKAKNPAEQKK CCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SINKLLIALAMGATLAACGSNTPEKPPTQDPNPPSNPAANEAQAAADQAAANPPADATP CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC AAADTAAAAANTAADAAATTTPPADAAKQSGAAPANKAKNPAEQKK CCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA