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The map label for this gene is yidD [C]

Identifier: 28198205

GI number: 28198205

Start: 359941

End: 360219

Strand: Reverse

Name: yidD [C]

Synonym: PD0282

Alternate gene names: 28198205

Gene position: 360219-359941 (Counterclockwise)

Preceding gene: 28198207

Following gene: 28198204

Centisome position: 14.3

GC content: 56.27

Gene sequence:

>279_bases
GTGCACAAAGTCATCATGCACCCACTCATCCTCTTGCTCAAGATTTACAAGCGCCTTATTAGCCCACTGTTAGGGCCACA
TTGCCGTTTCGAACCAAGTTGCTCTGAATACGCGATGGTGGCTATTGCCCGCTTCGGCACGCTGCGCGGCATATGGTTAG
CAGCACGTCGGCTGGCACGCTGCCATCCGTTGCAACTGGGTGGCCACGACCCGGTACCCGACAACACCAGCACACAGGTC
AATCCCCGTTCTCATCGCTGTACAGGACACCACCAATGA

Upstream 100 bases:

>100_bases
GCAGCCACAAAACACGCTTCCTTGACTCCCTGGTATCTGGGAAAGCGGCTTTTTATAGCCTACCTTCCCTAACCAATCAA
CCACGTGTTCATTAAATCAC

Downstream 100 bases:

>100_bases
ATCCAACCTTGATCGTGAACGCCCGCTTGGTCAATGAAGGCCGCGAATTCGACAGCGATTTGAGAATCGAGAACGGACGC
ATCGCCCGTATCGACACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MHKVIMHPLILLLKIYKRLISPLLGPHCRFEPSCSEYAMVAIARFGTLRGIWLAARRLARCHPLQLGGHDPVPDNTSTQV
NPRSHRCTGHHQ

Sequences:

>Translated_92_residues
MHKVIMHPLILLLKIYKRLISPLLGPHCRFEPSCSEYAMVAIARFGTLRGIWLAARRLARCHPLQLGGHDPVPDNTSTQV
NPRSHRCTGHHQ
>Mature_92_residues
MHKVIMHPLILLLKIYKRLISPLLGPHCRFEPSCSEYAMVAIARFGTLRGIWLAARRLARCHPLQLGGHDPVPDNTSTQV
NPRSHRCTGHHQ

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=65, Percent_Identity=60, Blast_Score=92, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y282_XYLFT (Q87EM1)

Other databases:

- EMBL:   AE009442
- RefSeq:   NP_778519.1
- STRING:   Q87EM1
- GeneID:   1144494
- GenomeReviews:   AE009442_GR
- KEGG:   xft:PD0282
- eggNOG:   COG0759
- HOGENOM:   HBG634291
- OMA:   SHRCTGH
- ProtClustDB:   PRK00041
- BioCyc:   XFAS183190:PD_0282-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 10439; Mature: 10439

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKVIMHPLILLLKIYKRLISPLLGPHCRFEPSCSEYAMVAIARFGTLRGIWLAARRLAR
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
CHPLQLGGHDPVPDNTSTQVNPRSHRCTGHHQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHKVIMHPLILLLKIYKRLISPLLGPHCRFEPSCSEYAMVAIARFGTLRGIWLAARRLAR
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
CHPLQLGGHDPVPDNTSTQVNPRSHRCTGHHQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12533478