| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
Click here to switch to the map view.
The map label for this gene is hisD [H]
Identifier: 27366197
GI number: 27366197
Start: 2984883
End: 2986178
Strand: Reverse
Name: hisD [H]
Synonym: VV1_2919
Alternate gene names: 27366197
Gene position: 2986178-2984883 (Counterclockwise)
Preceding gene: 161501801
Following gene: 27366196
Centisome position: 90.99
GC content: 47.15
Gene sequence:
>1296_bases ATGAGAACGGTTGTTTGGCAATCTCTTAGTGAGACGCAACAAGACGCTATTTTGGAACGTCCAGCGATAACAGAAGGTGC GAATATTACCGCTGCAGTAGCAGAAGTGATTGCGAAAGTCAGAGCAGAAGGCGATGCGGCGCTGTTCGAACTGACGGAAA AGTTTGATCGCGTTAAACCAGAATCGATTCGAGTGACTGAACAAGAAATCGAGGAGGCTTCTGCTCGCTTAACTGCAAAA ATGAAGCAAGCGCTTGAGCAGGCTTACGCCAATATCGCGAAGTTCCACAATGCCCAGAAACCGACGCCAATTAAAGTCGA AACACAACCGGGTGTGGTGTGTGAACAAGTCACTCGCCCGATACAAAAAGTGGGTTTATACATTCCTGGTGGCAGTGCAC CGCTGCCTTCAACGGTATTGATGTTGGGTGTTCCTGCGCAAATCGCGGGTTGCCGTAAAGTGGTTTTATGTTCACCGCCA CCGATTGCCGATGAAATTCTCTATGTGGCAAAGCTTTGTAATATAGATGAAGTTTACAATGTCGGTGGTGGGCAAGCGGT AGCGGCGATGGCTTATGGGACAGAAAGTGTCACTAAGGTGGATAAAATATTTGGTCCTGGCAACGCGTATGTCACAGAAG CAAAACGCCAAGTGAGCAATGATTTTCGTGGTGCCGCTATTGATATGCCCGCTGGGCCATCAGAAGTGTTGGTGATTGCT GATGAAACTGCAGATGCCGATTTTATCGCCGCCGATTTACTTAGCCAAGCTGAGCACGGACCAGACTCTCAAGTGGTTTT GGTGACTCCATCAGTATTGATTGCAGATCAAGTAACGGATGCTGTGCAGAAACAGTTGAAGCAATTATCGCGTGCCTCAA TTGCTGAAAAAGCACTAGCGTCGAGCTTGATTATTATTGCTGACTCCTTGACCCAAGCGGTTTCTATTTCAAATTATTAC GGTCCAGAGCATTTAATTGTTCAAACCAAAAATCCTCGAGAGTTGTTGCCATTGCTGGATAACGCAGGTTCCATTTTCTT GGGTGATTGGTCGCCTGAATCGGCGGGTGATTATGCGTCAGGAACCAACCACGTATTGCCGACGTATGGGTACACCCGTA CGTATTCAAGTTTAGGTTTGGCTGATTTTTCAAAACGTATGACGATTCAAGAACTATCGGCTGAAGGTTTAAAAACACTG GCACCTACGGTTGTTACAATGGCAGAAGCGGAAGGGTTGGATGCGCACAAACGTGCGGTGACCATTCGTGTCGAAAAGCT GAATGCACGTGGATAA
Upstream 100 bases:
>100_bases GTACAGAAAACCTATTCTGGGAAACGATGGAACAGCTCAAAGAACTTGGCGCGAGCTCTATTCTTGTTCTACCAATTGAA AAAATGATGGAGTAAGGCTC
Downstream 100 bases:
>100_bases GGAGAGAGAGAAAATGGAAAAACTTGCTCGAAAAAGTGTACAGAAACTGACTCCTTACCTTTCGGCGCGCCGTATCGGTG GAACCGGCGATGTTTGGTTG
Product: bifunctional histidinal dehydrogenase/ histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MRTVVWQSLSETQQDAILERPAITEGANITAAVAEVIAKVRAEGDAALFELTEKFDRVKPESIRVTEQEIEEASARLTAK MKQALEQAYANIAKFHNAQKPTPIKVETQPGVVCEQVTRPIQKVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPP PIADEILYVAKLCNIDEVYNVGGGQAVAAMAYGTESVTKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLVIA DETADADFIAADLLSQAEHGPDSQVVLVTPSVLIADQVTDAVQKQLKQLSRASIAEKALASSLIIIADSLTQAVSISNYY GPEHLIVQTKNPRELLPLLDNAGSIFLGDWSPESAGDYASGTNHVLPTYGYTRTYSSLGLADFSKRMTIQELSAEGLKTL APTVVTMAEAEGLDAHKRAVTIRVEKLNARG
Sequences:
>Translated_431_residues MRTVVWQSLSETQQDAILERPAITEGANITAAVAEVIAKVRAEGDAALFELTEKFDRVKPESIRVTEQEIEEASARLTAK MKQALEQAYANIAKFHNAQKPTPIKVETQPGVVCEQVTRPIQKVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPP PIADEILYVAKLCNIDEVYNVGGGQAVAAMAYGTESVTKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLVIA DETADADFIAADLLSQAEHGPDSQVVLVTPSVLIADQVTDAVQKQLKQLSRASIAEKALASSLIIIADSLTQAVSISNYY GPEHLIVQTKNPRELLPLLDNAGSIFLGDWSPESAGDYASGTNHVLPTYGYTRTYSSLGLADFSKRMTIQELSAEGLKTL APTVVTMAEAEGLDAHKRAVTIRVEKLNARG >Mature_431_residues MRTVVWQSLSETQQDAILERPAITEGANITAAVAEVIAKVRAEGDAALFELTEKFDRVKPESIRVTEQEIEEASARLTAK MKQALEQAYANIAKFHNAQKPTPIKVETQPGVVCEQVTRPIQKVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPP PIADEILYVAKLCNIDEVYNVGGGQAVAAMAYGTESVTKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLVIA DETADADFIAADLLSQAEHGPDSQVVLVTPSVLIADQVTDAVQKQLKQLSRASIAEKALASSLIIIADSLTQAVSISNYY GPEHLIVQTKNPRELLPLLDNAGSIFLGDWSPESAGDYASGTNHVLPTYGYTRTYSSLGLADFSKRMTIQELSAEGLKTL APTVVTMAEAEGLDAHKRAVTIRVEKLNARG
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=422, Percent_Identity=63.9810426540284, Blast_Score=558, Evalue=1e-160, Organism=Saccharomyces cerevisiae, GI6319819, Length=419, Percent_Identity=52.2673031026253, Blast_Score=416, Evalue=1e-117,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 46039; Mature: 46039
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTVVWQSLSETQQDAILERPAITEGANITAAVAEVIAKVRAEGDAALFELTEKFDRVKP CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC ESIRVTEQEIEEASARLTAKMKQALEQAYANIAKFHNAQKPTPIKVETQPGVVCEQVTRP CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHH IQKVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPPPIADEILYVAKLCNIDEVYN HHHCCEEECCCCCCCCCEEEEECCCHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHC VGGGQAVAAMAYGTESVTKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLVIA CCCCCEEEEEHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEE DETADADFIAADLLSQAEHGPDSQVVLVTPSVLIADQVTDAVQKQLKQLSRASIAEKALA ECCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSLIIIADSLTQAVSISNYYGPEHLIVQTKNPRELLPLLDNAGSIFLGDWSPESAGDYAS HHHHEEEHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCEEEECCCCCCCCCCCC GTNHVLPTYGYTRTYSSLGLADFSKRMTIQELSAEGLKTLAPTVVTMAEAEGLDAHKRAV CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE TIRVEKLNARG EEEEEECCCCC >Mature Secondary Structure MRTVVWQSLSETQQDAILERPAITEGANITAAVAEVIAKVRAEGDAALFELTEKFDRVKP CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC ESIRVTEQEIEEASARLTAKMKQALEQAYANIAKFHNAQKPTPIKVETQPGVVCEQVTRP CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHH IQKVGLYIPGGSAPLPSTVLMLGVPAQIAGCRKVVLCSPPPIADEILYVAKLCNIDEVYN HHHCCEEECCCCCCCCCEEEEECCCHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHC VGGGQAVAAMAYGTESVTKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLVIA CCCCCEEEEEHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEE DETADADFIAADLLSQAEHGPDSQVVLVTPSVLIADQVTDAVQKQLKQLSRASIAEKALA ECCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSLIIIADSLTQAVSISNYYGPEHLIVQTKNPRELLPLLDNAGSIFLGDWSPESAGDYAS HHHHEEEHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCEEEECCCCCCCCCCCC GTNHVLPTYGYTRTYSSLGLADFSKRMTIQELSAEGLKTLAPTVVTMAEAEGLDAHKRAV CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE TIRVEKLNARG EEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]