| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27365703
Identifier: 27365703
GI number: 27365703
Start: 2419143
End: 2419832
Strand: Reverse
Name: 27365703
Synonym: VV1_2384
Alternate gene names: NA
Gene position: 2419832-2419143 (Counterclockwise)
Preceding gene: 326423998
Following gene: 27365702
Centisome position: 73.73
GC content: 42.75
Gene sequence:
>690_bases ATGAAAAAAAACAGAGTCGTTACGACCGAAGATATCTTGTTAAAACTGTGTCAGTCCGTATCTGGAGTGCTCACTTCTGC CACCTCTTCTCAAATTCACTATTCTGCAATGGTGCAGAAAATCAACAAAACCAGTCTAAAGCCTGATTTCGGCTGTTTTG TTCTTTTTGATGGTGGTTTTACTGGCCTTGTCGTCATCAACTTTACCGCAAAAGCAGCATTAGAGATTTACACCAATTAC ATGCGCAATATGGGCATGCCAGAAGAAGAACTGGCTGTGTTGCACACCTCCGATGAAGTGGGCGATGTGCTGGGTGAGTT GATGAACCAATTAGTCGGTGATTTCACCAATAAAATTCGCAAAGAACTGCAAACCAACATCACCCAAAATCAACCCAAAA TGTTGTCTCTGAACAAACAGGTTATTCTTTCGGTGGATACCAACCTAGACCGCCCACAAGCGCGTCGCGTGACCTTCTCA ACGGCAAATAACAACATCTTCTACTTAGAGCTTGCGATGGATAAAACTGAATTTATTCAGCTTGAAGATTTCGAAGTCGC TGAAGATGAGAATCCGGATGATATTTTAGAAGCGGCGCAAGCAAACATGCGCGGCAAGAAAGCAGAGAGCAACTCATCAG AAGAAGAATTAGACATTACCTCAGATTTGCTTGATGAACTGGGTATCTAA
Upstream 100 bases:
>100_bases AATCTGAATGCAAAAATGAAAGTTGTACTTTCTTTTCCGGTGATACCCACCTAAAGTCATTGAAAGACCATATGTAAAGA ACTTAAACAGAGCATTGATA
Downstream 100 bases:
>100_bases GCCTTTTCGCAACATCTAGCCCGCTAAAGCCGTGTCCACTGTGACACGGCTTTTTTGTCACCGCACCTCTCGCAAGGATT CAAATTTTGCCGAAAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MKKNRVVTTEDILLKLCQSVSGVLTSATSSQIHYSAMVQKINKTSLKPDFGCFVLFDGGFTGLVVINFTAKAALEIYTNY MRNMGMPEEELAVLHTSDEVGDVLGELMNQLVGDFTNKIRKELQTNITQNQPKMLSLNKQVILSVDTNLDRPQARRVTFS TANNNIFYLELAMDKTEFIQLEDFEVAEDENPDDILEAAQANMRGKKAESNSSEEELDITSDLLDELGI
Sequences:
>Translated_229_residues MKKNRVVTTEDILLKLCQSVSGVLTSATSSQIHYSAMVQKINKTSLKPDFGCFVLFDGGFTGLVVINFTAKAALEIYTNY MRNMGMPEEELAVLHTSDEVGDVLGELMNQLVGDFTNKIRKELQTNITQNQPKMLSLNKQVILSVDTNLDRPQARRVTFS TANNNIFYLELAMDKTEFIQLEDFEVAEDENPDDILEAAQANMRGKKAESNSSEEELDITSDLLDELGI >Mature_229_residues MKKNRVVTTEDILLKLCQSVSGVLTSATSSQIHYSAMVQKINKTSLKPDFGCFVLFDGGFTGLVVINFTAKAALEIYTNY MRNMGMPEEELAVLHTSDEVGDVLGELMNQLVGDFTNKIRKELQTNITQNQPKMLSLNKQVILSVDTNLDRPQARRVTFS TANNNIFYLELAMDKTEFIQLEDFEVAEDENPDDILEAAQANMRGKKAESNSSEEELDITSDLLDELGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25597; Mature: 25597
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNRVVTTEDILLKLCQSVSGVLTSATSSQIHYSAMVQKINKTSLKPDFGCFVLFDGGF CCCCCEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCC TGLVVINFTAKAALEIYTNYMRNMGMPEEELAVLHTSDEVGDVLGELMNQLVGDFTNKIR EEEEEEEEHHHHHHHHHHHHHHHCCCCHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHH KELQTNITQNQPKMLSLNKQVILSVDTNLDRPQARRVTFSTANNNIFYLELAMDKTEFIQ HHHHHCCCCCCCCEEECCCEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCCEEE LEDFEVAEDENPDDILEAAQANMRGKKAESNSSEEELDITSDLLDELGI EECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKNRVVTTEDILLKLCQSVSGVLTSATSSQIHYSAMVQKINKTSLKPDFGCFVLFDGGF CCCCCEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCC TGLVVINFTAKAALEIYTNYMRNMGMPEEELAVLHTSDEVGDVLGELMNQLVGDFTNKIR EEEEEEEEHHHHHHHHHHHHHHHCCCCHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHH KELQTNITQNQPKMLSLNKQVILSVDTNLDRPQARRVTFSTANNNIFYLELAMDKTEFIQ HHHHHCCCCCCCCEEECCCEEEEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCCEEE LEDFEVAEDENPDDILEAAQANMRGKKAESNSSEEELDITSDLLDELGI EECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA