Definition Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence.
Accession NC_004459
Length 3,281,866

Click here to switch to the map view.

The map label for this gene is 27365702

Identifier: 27365702

GI number: 27365702

Start: 2418306

End: 2418995

Strand: Reverse

Name: 27365702

Synonym: VV1_2383

Alternate gene names: NA

Gene position: 2418995-2418306 (Counterclockwise)

Preceding gene: 27365703

Following gene: 326423995

Centisome position: 73.71

GC content: 46.09

Gene sequence:

>690_bases
ATGGATAAACAAAAAGCGCTGAAGAAAATTGCCAAATGCCTAGAGCTAGGCAACTCCGCCAATGTCAACGAAGCGGCCAA
CGCGATTAAGATGGCGCATCGCTTGATGCTCAAGTATGGCCTCGACAAAGACGATATCGAGTTCATTAAGATGGGAAAAA
CTCAATCAACCCATCTTCTGCCTGCGAGTATCAGTTCCGTCTTACTGCGTGTTATTCGTGGCATCAATACCAAATTTGGT
GTAGAAGCAGTGTTGCTTAACCATAAGGGACTCAAACGCTTAGAGTTTATTGGTGAAGCTGACCGTGCTATTTTCGCCGC
TTTCGCCTTTGACATTATTTACCGTGAAATGAACGAAAGCACGGGCCAATTCCGCAATAGCTTTGCAGGCTCTGGCACCT
CTTCACTTGAGGTGACACGCCGAGTCAACTCGTTTGTCTCTGGTTGGGTAGAGGGCGCATTGGAAAAACTGCCAGTGATC
ACGCCTGATGAAGAATCGGCTAACAAAATCAATAACTACATCGATAAAGAGTTCCAAAACATCGATCGTGAAACCTTTAA
GCAGCAGTTGCGTGAGGCGATGAAAAATCTCACTGCCGATTACGAAGTGGGCCTGAAAAAAGGGCGCAAAGTGTCGGTTA
ACCGCCCGGTTGGTGGTGCTCAAGCAATGAAACAAATCGAAAAAAGATAA

Upstream 100 bases:

>100_bases
GGCTTTTTTGTCACCGCACCTCTCGCAAGGATTCAAATTTTGCCGAAAAAAAGGTATGATGTCCGACTTTGCTGATTGAG
TTAGGTTTTTGCCATTGTCT

Downstream 100 bases:

>100_bases
CCTTACACTGACATTTCTCTCATTGACTTGCTGAATAATCCGCACGGAGGCAGCAGTTAGCCTCTGAATGTACATGGAGA
GATGACTTTGAAAAAAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MDKQKALKKIAKCLELGNSANVNEAANAIKMAHRLMLKYGLDKDDIEFIKMGKTQSTHLLPASISSVLLRVIRGINTKFG
VEAVLLNHKGLKRLEFIGEADRAIFAAFAFDIIYREMNESTGQFRNSFAGSGTSSLEVTRRVNSFVSGWVEGALEKLPVI
TPDEESANKINNYIDKEFQNIDRETFKQQLREAMKNLTADYEVGLKKGRKVSVNRPVGGAQAMKQIEKR

Sequences:

>Translated_229_residues
MDKQKALKKIAKCLELGNSANVNEAANAIKMAHRLMLKYGLDKDDIEFIKMGKTQSTHLLPASISSVLLRVIRGINTKFG
VEAVLLNHKGLKRLEFIGEADRAIFAAFAFDIIYREMNESTGQFRNSFAGSGTSSLEVTRRVNSFVSGWVEGALEKLPVI
TPDEESANKINNYIDKEFQNIDRETFKQQLREAMKNLTADYEVGLKKGRKVSVNRPVGGAQAMKQIEKR
>Mature_229_residues
MDKQKALKKIAKCLELGNSANVNEAANAIKMAHRLMLKYGLDKDDIEFIKMGKTQSTHLLPASISSVLLRVIRGINTKFG
VEAVLLNHKGLKRLEFIGEADRAIFAAFAFDIIYREMNESTGQFRNSFAGSGTSSLEVTRRVNSFVSGWVEGALEKLPVI
TPDEESANKINNYIDKEFQNIDRETFKQQLREAMKNLTADYEVGLKKGRKVSVNRPVGGAQAMKQIEKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25640; Mature: 25640

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKQKALKKIAKCLELGNSANVNEAANAIKMAHRLMLKYGLDKDDIEFIKMGKTQSTHLL
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCC
PASISSVLLRVIRGINTKFGVEAVLLNHKGLKRLEFIGEADRAIFAAFAFDIIYREMNES
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGQFRNSFAGSGTSSLEVTRRVNSFVSGWVEGALEKLPVITPDEESANKINNYIDKEFQN
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
IDRETFKQQLREAMKNLTADYEVGLKKGRKVSVNRPVGGAQAMKQIEKR
CCHHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MDKQKALKKIAKCLELGNSANVNEAANAIKMAHRLMLKYGLDKDDIEFIKMGKTQSTHLL
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCC
PASISSVLLRVIRGINTKFGVEAVLLNHKGLKRLEFIGEADRAIFAAFAFDIIYREMNES
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGQFRNSFAGSGTSSLEVTRRVNSFVSGWVEGALEKLPVITPDEESANKINNYIDKEFQN
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
IDRETFKQQLREAMKNLTADYEVGLKKGRKVSVNRPVGGAQAMKQIEKR
CCHHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA