Definition Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence.
Accession NC_004459
Length 3,281,866

Click here to switch to the map view.

The map label for this gene is 27365695

Identifier: 27365695

GI number: 27365695

Start: 2411774

End: 2412550

Strand: Reverse

Name: 27365695

Synonym: VV1_2376

Alternate gene names: NA

Gene position: 2412550-2411774 (Counterclockwise)

Preceding gene: 27365697

Following gene: 27365691

Centisome position: 73.51

GC content: 45.56

Gene sequence:

>777_bases
ATGAGCTTATTTCTTCGTACTACCGCATTGATGCTTTTGGTACTAAGCCGTGCACCTGCGTTTGCAGCCATTCCCACCGC
GCCATCGAACCAAGAAAAACAGCGCGAAACAAGCCAAAATGAAGTGTGCTCAAAACTGTTTAAACACAGCTTGAGTGGTT
TATACGGCATTCAATCCACTGATACGCAACCACTTCAACCCTACACTGATTTTGACGTGCTTTATAGTAAAGCGCACCAA
GCGCAATTTGAGCTCGAAACCATCGTAAAGAGCACCGCACTGTTGACGGATACTCAGCCCTATTTTGCAGGCGTGAAATC
ACAACAACGCGCGAAACAGAAAATTGCTTTGGAACTTAATAATCAACCAGAACGCATTACTGACCTCGCTAGAGCAACCA
TTGTAGCCGACGACGTAGCAAGCCTTGTTAGTGCCTACGAGGCTTTAGAGCGAGAAACACGCATCGTCAAAGTGAAAAAC
CGCTTTAAGAGCCCAGGTGAGTCTGGGTATCGTGACCTCAACCTGCTGGTACAACTACCAAAGACCAACTTAGTTGCAGA
AGTCCAATTGCACTTGAAAGCCATTGCAGATGTTAAAAGTGGCCCTGAACACGATTTATATCAGCAAATTCAAATGATGG
AGAGACAAGCAGCAAGTGAAACGCGTTCACTGAATGATGTCGAGTTGGCGACCATTAAACGACTAAGAAGCCACTCAAAA
GATCTTTACCAACAAGCGTGGCAACCTTATTTGACCACACACTTGGAAGCGGCTTAA

Upstream 100 bases:

>100_bases
TTGTTTCCTGACAGTGCGCCCCCATAACTTAAGTAACTTGACTGTGTTTTAGACCTTTTGACTCCCCGTTTACTAAAACA
ACGCAAGTTAAGGAGAGTGA

Downstream 100 bases:

>100_bases
GCGCTTAAGCAAATAAGCAAATAAGCAAATAAGTTAGATACCGCTGAAAAACGAAGACCACGCAATGCGTGGTCTTTCTG
TATTCATAGTTCCATTACTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MSLFLRTTALMLLVLSRAPAFAAIPTAPSNQEKQRETSQNEVCSKLFKHSLSGLYGIQSTDTQPLQPYTDFDVLYSKAHQ
AQFELETIVKSTALLTDTQPYFAGVKSQQRAKQKIALELNNQPERITDLARATIVADDVASLVSAYEALERETRIVKVKN
RFKSPGESGYRDLNLLVQLPKTNLVAEVQLHLKAIADVKSGPEHDLYQQIQMMERQAASETRSLNDVELATIKRLRSHSK
DLYQQAWQPYLTTHLEAA

Sequences:

>Translated_258_residues
MSLFLRTTALMLLVLSRAPAFAAIPTAPSNQEKQRETSQNEVCSKLFKHSLSGLYGIQSTDTQPLQPYTDFDVLYSKAHQ
AQFELETIVKSTALLTDTQPYFAGVKSQQRAKQKIALELNNQPERITDLARATIVADDVASLVSAYEALERETRIVKVKN
RFKSPGESGYRDLNLLVQLPKTNLVAEVQLHLKAIADVKSGPEHDLYQQIQMMERQAASETRSLNDVELATIKRLRSHSK
DLYQQAWQPYLTTHLEAA
>Mature_257_residues
SLFLRTTALMLLVLSRAPAFAAIPTAPSNQEKQRETSQNEVCSKLFKHSLSGLYGIQSTDTQPLQPYTDFDVLYSKAHQA
QFELETIVKSTALLTDTQPYFAGVKSQQRAKQKIALELNNQPERITDLARATIVADDVASLVSAYEALERETRIVKVKNR
FKSPGESGYRDLNLLVQLPKTNLVAEVQLHLKAIADVKSGPEHDLYQQIQMMERQAASETRSLNDVELATIKRLRSHSKD
LYQQAWQPYLTTHLEAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29044; Mature: 28913

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFLRTTALMLLVLSRAPAFAAIPTAPSNQEKQRETSQNEVCSKLFKHSLSGLYGIQST
CCHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DTQPLQPYTDFDVLYSKAHQAQFELETIVKSTALLTDTQPYFAGVKSQQRAKQKIALELN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHEEC
NQPERITDLARATIVADDVASLVSAYEALERETRIVKVKNRFKSPGESGYRDLNLLVQLP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEECC
KTNLVAEVQLHLKAIADVKSGPEHDLYQQIQMMERQAASETRSLNDVELATIKRLRSHSK
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
DLYQQAWQPYLTTHLEAA
HHHHHHCCHHHHHHCCCC
>Mature Secondary Structure 
SLFLRTTALMLLVLSRAPAFAAIPTAPSNQEKQRETSQNEVCSKLFKHSLSGLYGIQST
CHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DTQPLQPYTDFDVLYSKAHQAQFELETIVKSTALLTDTQPYFAGVKSQQRAKQKIALELN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHEEC
NQPERITDLARATIVADDVASLVSAYEALERETRIVKVKNRFKSPGESGYRDLNLLVQLP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEECC
KTNLVAEVQLHLKAIADVKSGPEHDLYQQIQMMERQAASETRSLNDVELATIKRLRSHSK
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
DLYQQAWQPYLTTHLEAA
HHHHHHCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA