| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27365672
Identifier: 27365672
GI number: 27365672
Start: 2382146
End: 2383309
Strand: Reverse
Name: 27365672
Synonym: VV1_2353
Alternate gene names: NA
Gene position: 2383309-2382146 (Counterclockwise)
Preceding gene: 326423988
Following gene: 27365671
Centisome position: 72.62
GC content: 48.71
Gene sequence:
>1164_bases ATGAAAAAAACCATGTTAGCAAGCCTCATCGTTGCTACCACTTTTAGCACCAATGCTGCCAATCTTGAGGATCTGTCCAT CAGTGGATTTGGCTCCGTCGGTATGGGCAAATCAAACAACGATATTGGTTACGCACGATACACAGCGGAAAAAATCGATT GGGAACAAGAAACCTTGGCGGGTCTTCAGTTTGATTTTCAAATCAACGACAAGGTGAAGTTTGTCACCCAATTGGTGGCA AACAGCCGCTATGATTATGCGCCTAAAATTGAAATGGCCTACGCCTCTTACGAATTTGAAGCTTTCACTGCTCGCGCGGG TAAACTGCGTTTGCCTTTGTTCTTCTATTCTGACTACATTGATTTAGGCTACGCCTACCCGATGATTCGTCCGTCTCAAG AGACTTACGAGCACATCGTACTTAAGAGCTACACCGGTGCAGATCTTCTTATCCCGGTTGAATTTGAGCACTCAAGCCTA CTGCTACAGCCCGTTGTCGGCATTGCCACCATCGATGAGGATGATTCGAGCATTGGCGAAGTCAAACTGGACAAAATGCT CGGCCTTTCTGCTAACTGGAACTACGGCGACTTCTCGCTGCGCGGCTCTTACTTTATCGCCGAAGCCAATCCTAAATGCG ACAAAGGAGATACCAACTCGGCCCCTTGCCAACGTGCTGCGTTGTTAGGCGTTCACAAGCAAGATGGCCAGTTCATTTCA CTTGGCGCGCAATATGATAATGGCAGCCTGCTCGCGAACATCGAAGCGACGGACGTGAAGCTCGATGGCAAGTTCAGTGA TACCCGCTCTGCTTCGGGCTTGCTGGGTTACCGAGTGGCCGCCTTTACGCCATATTTAGCGGTAAGCTGGATGCAAACCA CCGATAACGATGAGCGACCAGCACCAACTCCTGCCCTTGCCGCAACAAACCTTCCTGCGTATAAACAAGCGCTCGGGTTG AATCGCTTGATGAACTATGAGCGCTTATCCTACTCCATTGGAAGCCGTTGGGATTTCGCCACCAACATGGCACTGAAATT CGATATCACGTACGCCGATTATCAAAACACCAGTGGCGGCTTTAAGAGCAACATTGATAACACTGGAGCGTTTAATGAAA AAGACAGCGTGGTTTACTCTGCCCGTCTAGATTTCGTTTTCTAA
Upstream 100 bases:
>100_bases CGCACTTGCTTTGGCACTTGGTCGTGTTGACCAGGTGTGGATTGCCGCACCTTAAATTTCATAAAAAGCAAAAATAACGA ACACAGTAGTGGAGTTCAGA
Downstream 100 bases:
>100_bases GGAGCCTCTCATGAACAAACTGATTCCATTTTTTGCAGCATCCCTACTCTCTTTCAATGCGATGGCAGGCATGGTTGTCA TTGGTAATGCAGCGGGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MKKTMLASLIVATTFSTNAANLEDLSISGFGSVGMGKSNNDIGYARYTAEKIDWEQETLAGLQFDFQINDKVKFVTQLVA NSRYDYAPKIEMAYASYEFEAFTARAGKLRLPLFFYSDYIDLGYAYPMIRPSQETYEHIVLKSYTGADLLIPVEFEHSSL LLQPVVGIATIDEDDSSIGEVKLDKMLGLSANWNYGDFSLRGSYFIAEANPKCDKGDTNSAPCQRAALLGVHKQDGQFIS LGAQYDNGSLLANIEATDVKLDGKFSDTRSASGLLGYRVAAFTPYLAVSWMQTTDNDERPAPTPALAATNLPAYKQALGL NRLMNYERLSYSIGSRWDFATNMALKFDITYADYQNTSGGFKSNIDNTGAFNEKDSVVYSARLDFVF
Sequences:
>Translated_387_residues MKKTMLASLIVATTFSTNAANLEDLSISGFGSVGMGKSNNDIGYARYTAEKIDWEQETLAGLQFDFQINDKVKFVTQLVA NSRYDYAPKIEMAYASYEFEAFTARAGKLRLPLFFYSDYIDLGYAYPMIRPSQETYEHIVLKSYTGADLLIPVEFEHSSL LLQPVVGIATIDEDDSSIGEVKLDKMLGLSANWNYGDFSLRGSYFIAEANPKCDKGDTNSAPCQRAALLGVHKQDGQFIS LGAQYDNGSLLANIEATDVKLDGKFSDTRSASGLLGYRVAAFTPYLAVSWMQTTDNDERPAPTPALAATNLPAYKQALGL NRLMNYERLSYSIGSRWDFATNMALKFDITYADYQNTSGGFKSNIDNTGAFNEKDSVVYSARLDFVF >Mature_387_residues MKKTMLASLIVATTFSTNAANLEDLSISGFGSVGMGKSNNDIGYARYTAEKIDWEQETLAGLQFDFQINDKVKFVTQLVA NSRYDYAPKIEMAYASYEFEAFTARAGKLRLPLFFYSDYIDLGYAYPMIRPSQETYEHIVLKSYTGADLLIPVEFEHSSL LLQPVVGIATIDEDDSSIGEVKLDKMLGLSANWNYGDFSLRGSYFIAEANPKCDKGDTNSAPCQRAALLGVHKQDGQFIS LGAQYDNGSLLANIEATDVKLDGKFSDTRSASGLLGYRVAAFTPYLAVSWMQTTDNDERPAPTPALAATNLPAYKQALGL NRLMNYERLSYSIGSRWDFATNMALKFDITYADYQNTSGGFKSNIDNTGAFNEKDSVVYSARLDFVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42843; Mature: 42843
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTMLASLIVATTFSTNAANLEDLSISGFGSVGMGKSNNDIGYARYTAEKIDWEQETLA CCHHHHHHHHEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEHHHCCCCHHHHH GLQFDFQINDKVKFVTQLVANSRYDYAPKIEMAYASYEFEAFTARAGKLRLPLFFYSDYI CEEEEEEECCHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEECCCCEEEEEEEECCHH DLGYAYPMIRPSQETYEHIVLKSYTGADLLIPVEFEHSSLLLQPVVGIATIDEDDSSIGE HCCEECCCCCCCHHHHHEEEEEECCCCEEEEEEEECCCCEEEECCEEEEEECCCCCCCCC VKLDKMLGLSANWNYGDFSLRGSYFIAEANPKCDKGDTNSAPCQRAALLGVHKQDGQFIS EEEEHHCCCCCCCCCCCEEECCCEEEEECCCCCCCCCCCCCCHHHHHHEEEECCCCCEEE LGAQYDNGSLLANIEATDVKLDGKFSDTRSASGLLGYRVAAFTPYLAVSWMQTTDNDERP EEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCHHEEHHHHHCCCCEEEEEECCCCCCCC APTPALAATNLPAYKQALGLNRLMNYERLSYSIGSRWDFATNMALKFDITYADYQNTSGG CCCCCEEECCCCHHHHHHHHHHHHCHHHHHHCCCCCCCEEECEEEEEEEEEECCCCCCCC FKSNIDNTGAFNEKDSVVYSARLDFVF CCCCCCCCCCCCCCCCEEEEEEEEEEC >Mature Secondary Structure MKKTMLASLIVATTFSTNAANLEDLSISGFGSVGMGKSNNDIGYARYTAEKIDWEQETLA CCHHHHHHHHEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEHHHCCCCHHHHH GLQFDFQINDKVKFVTQLVANSRYDYAPKIEMAYASYEFEAFTARAGKLRLPLFFYSDYI CEEEEEEECCHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEECCCCEEEEEEEECCHH DLGYAYPMIRPSQETYEHIVLKSYTGADLLIPVEFEHSSLLLQPVVGIATIDEDDSSIGE HCCEECCCCCCCHHHHHEEEEEECCCCEEEEEEEECCCCEEEECCEEEEEECCCCCCCCC VKLDKMLGLSANWNYGDFSLRGSYFIAEANPKCDKGDTNSAPCQRAALLGVHKQDGQFIS EEEEHHCCCCCCCCCCCEEECCCEEEEECCCCCCCCCCCCCCHHHHHHEEEECCCCCEEE LGAQYDNGSLLANIEATDVKLDGKFSDTRSASGLLGYRVAAFTPYLAVSWMQTTDNDERP EEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCHHEEHHHHHCCCCEEEEEECCCCCCCC APTPALAATNLPAYKQALGLNRLMNYERLSYSIGSRWDFATNMALKFDITYADYQNTSGG CCCCCEEECCCCHHHHHHHHHHHHCHHHHHHCCCCCCCEEECEEEEEEEEEECCCCCCCC FKSNIDNTGAFNEKDSVVYSARLDFVF CCCCCCCCCCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA