Click here to switch to the map view.

The map label for this gene is 27365534

Identifier: 27365534

GI number: 27365534

Start: 2210939

End: 2211472

Strand: Reverse

Name: 27365534

Synonym: VV1_2207

Alternate gene names: NA

Gene position: 2211472-2210939 (Counterclockwise)

Preceding gene: 27365536

Following gene: 27365533

Centisome position: 67.38

GC content: 49.06

Gene sequence:

>534_bases
ATGTCTCGTATCCAAAAACTGGTTAACCCACAAGGCGCAGCGGAAATCACACTATCAGCGATCGAAAAGAAACTCGGTAT
GGTGCCAAACCTCTACGCCACCATCGCTCACTCGCCAACGGTATTGAACTCAATTCTGGCGTTTGGTGATTCGCTGGGCA
AAGGCAAACTGACCGCTCGCCAACGTGAATTGGTGGCTTTAGCGGTAGGTCAAGCCAATGCTTGTCAATACTGCCTATCC
GCTCACACGCTGATTGCATCAAGCACGGGTTTAACCAAAGAAGAAATCGTGGCAGCACGTAAAGTCGAAGCCGATAACAG
CGTTGATCAAGCGATTGTTGAATTTGCAGCACTGGTGGTGACACAACGCGGCGTGATCTCAAACGAGCTGTTAGCCGATT
TACAAGCGAAGGGGCTCGATAACGAATTGTTGTTTGAAGTATTAGCGCAAGTCGCACTTAACACCTTTACCAACTACGCA
AACCACATTGCGGAGACAGACATCGATTTCCCGGTGGTCTCGTTGGACGTTTAA

Upstream 100 bases:

>100_bases
AGACCCTTGGTATATCCAATAAGACTTTTAGTGATAAATCGTCTTACTTCTTGTGTCAATATCTCTTCAACAAATCAGCA
CACACAAAAAGGAAAACATT

Downstream 100 bases:

>100_bases
TCTGGTAAGCCTCAGACACGCTCCCTCAACCTCGGTTGGGGGAGTTGTTTATTGGGCAAAAGCAGCACTCAACCATAGAC
TTTGGGGGAAAGCTATTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Alkylhydroperoxidase Like Protein AhpD Family; Alkylhydroperoxidase AhpD Core; Carboxymuconolactone Decarboxylase; Peroxidase-Related; Alkylhydroperoxidase AhpD Family Core Domain Protein; Carboxymuconolactone Decarboxylase Family Protein; Macrophage Infectivity Potentiator-Related Protein; Alkylhydroperoxidase-Like Protein AhpD Family; Peroxidase-Like Protein; Alpha/Beta Hydrolase; 24 KDa Macrophage-Induced Protein; Carboxymuconolactone Decarboxylase Family; 4-Carboxymuconolactone Decarboxylase; Alkylhydroperoxidase AhpD Domain Protein; Macrophage Infectivity Potentiator Protein; Alkylhydroperoxidase-Like Protein; Mip Protein; Ypothetical Protein SMU.; MIP-(Macrophage Infectivity Potentiator)-Like Protein; AhpD-Like Alkylhydroperoxidase; Alkylhydroperoxidase AhpD; Antioxydant Protein; Peroxidase; Alkylhydroperoxidase AhpD Family Protein; Alkylhydroperoxidase AhpD Family Core Domain Protein MED; Alkylhydroperoxidase Like Protein AhpD Family Protein

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSRIQKLVNPQGAAEITLSAIEKKLGMVPNLYATIAHSPTVLNSILAFGDSLGKGKLTARQRELVALAVGQANACQYCLS
AHTLIASSTGLTKEEIVAARKVEADNSVDQAIVEFAALVVTQRGVISNELLADLQAKGLDNELLFEVLAQVALNTFTNYA
NHIAETDIDFPVVSLDV

Sequences:

>Translated_177_residues
MSRIQKLVNPQGAAEITLSAIEKKLGMVPNLYATIAHSPTVLNSILAFGDSLGKGKLTARQRELVALAVGQANACQYCLS
AHTLIASSTGLTKEEIVAARKVEADNSVDQAIVEFAALVVTQRGVISNELLADLQAKGLDNELLFEVLAQVALNTFTNYA
NHIAETDIDFPVVSLDV
>Mature_176_residues
SRIQKLVNPQGAAEITLSAIEKKLGMVPNLYATIAHSPTVLNSILAFGDSLGKGKLTARQRELVALAVGQANACQYCLSA
HTLIASSTGLTKEEIVAARKVEADNSVDQAIVEFAALVVTQRGVISNELLADLQAKGLDNELLFEVLAQVALNTFTNYAN
HIAETDIDFPVVSLDV

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18847; Mature: 18716

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIQKLVNPQGAAEITLSAIEKKLGMVPNLYATIAHSPTVLNSILAFGDSLGKGKLTAR
CHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHH
QRELVALAVGQANACQYCLSAHTLIASSTGLTKEEIVAARKVEADNSVDQAIVEFAALVV
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
TQRGVISNELLADLQAKGLDNELLFEVLAQVALNTFTNYANHIAETDIDFPVVSLDV
HHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC
>Mature Secondary Structure 
SRIQKLVNPQGAAEITLSAIEKKLGMVPNLYATIAHSPTVLNSILAFGDSLGKGKLTAR
HHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHH
QRELVALAVGQANACQYCLSAHTLIASSTGLTKEEIVAARKVEADNSVDQAIVEFAALVV
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH
TQRGVISNELLADLQAKGLDNELLFEVLAQVALNTFTNYANHIAETDIDFPVVSLDV
HHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA