| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27365195
Identifier: 27365195
GI number: 27365195
Start: 1841926
End: 1842789
Strand: Reverse
Name: 27365195
Synonym: VV1_1844
Alternate gene names: NA
Gene position: 1842789-1841926 (Counterclockwise)
Preceding gene: 27365196
Following gene: 326423898
Centisome position: 56.15
GC content: 46.3
Gene sequence:
>864_bases ATGCAGACTGGTCTAAAAATAAAAATCTTTGAGGCTGGGCACTGCGTACACCCTAGTTTTGTCGTCAAACCCGGCTCTGG GTTAAAGCCAAGATCGTTTCCAGCGGCTGTCGCGTTAATTCAACACCCAACTAAAGGTAACATTCTGTTTGATACTGGGT ATCACGAGCATTTTTTCCGTGCCACTCGTCCCTTCCCTGAACGCTTTTATGCTTGGACAACACCATGTCACTATCAAAAA GAGCGCGGAATTGTGGCCCAGTTAGCAAAAGAAAAAATCGGACCTCATGAGATTGAGCACTTGGTCCTTTCTCACTTCCA TGCCGACCACATCGCTGCCGTGTCTGAGTTTGCGCACTCCCAATTACATTGCCAACAAAAAGGAGTGGACGCCCTAACTA AGAGTGGTCGAGTGGGAGGCGTTAGAAAAGGATACCTAAAAGCGCTACTCCCTCAACAACTCGAATCCAACTTGGTCATG CACCGTGATTTTTCCATCCCCATTGGTGAAATCCTTCCCCATTGCCAAGGCGTTGATCTGCTTTGTAAAGATATGTTCAA CGACGGCTTAATTTACATGGTGAGTTTACCCGGACATGCTGCTGGTCAAGTAGGGCTTTTAGTGAAGAGAGAGCAAGGTT GGCTGTTCTTGTTAGCTGATGCCTGTTGGTTAATCGAGAACTTGAGTGAAAACATCGATCAACATTGGCTCGCGAACCTG CTTTGCGATGATACCCAAGCCTACAAGCAAACACTCTCTGAGTTGAGAAATTGCTACCAGCATACCCATCATTTTGTGCG CTTTGTGCCTTCTCATTGCCAAGCGACAATCCAACAGTTAATTACAGAAGGATGGATAATGTGA
Upstream 100 bases:
>100_bases GCAGGGTTATTTAACTACCACCAAACTCTAGATATCAGTAAGGCGCAGAAAAAGCTGAATTACCAACCGCTTTTTTCAGT TCAAGAAGGAATCCAACAGT
Downstream 100 bases:
>100_bases GAACGCTTCTCTCTGAGTTTTGGCGTACGCGCTACCGCCCTTTTAGCTCAAGAACACATGTTGAAAAGTGGCAACAAAAA CAGGTAACACAACATCTGGA
Product: GumP protein
Products: NA
Alternate protein names: Metal Dependent Hydrolase; Beta-Lactamase Domain-Containing Protein; GumP Protein; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; N-Acylhomoserine Lactone Degradation Protein AhlK
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MQTGLKIKIFEAGHCVHPSFVVKPGSGLKPRSFPAAVALIQHPTKGNILFDTGYHEHFFRATRPFPERFYAWTTPCHYQK ERGIVAQLAKEKIGPHEIEHLVLSHFHADHIAAVSEFAHSQLHCQQKGVDALTKSGRVGGVRKGYLKALLPQQLESNLVM HRDFSIPIGEILPHCQGVDLLCKDMFNDGLIYMVSLPGHAAGQVGLLVKREQGWLFLLADACWLIENLSENIDQHWLANL LCDDTQAYKQTLSELRNCYQHTHHFVRFVPSHCQATIQQLITEGWIM
Sequences:
>Translated_287_residues MQTGLKIKIFEAGHCVHPSFVVKPGSGLKPRSFPAAVALIQHPTKGNILFDTGYHEHFFRATRPFPERFYAWTTPCHYQK ERGIVAQLAKEKIGPHEIEHLVLSHFHADHIAAVSEFAHSQLHCQQKGVDALTKSGRVGGVRKGYLKALLPQQLESNLVM HRDFSIPIGEILPHCQGVDLLCKDMFNDGLIYMVSLPGHAAGQVGLLVKREQGWLFLLADACWLIENLSENIDQHWLANL LCDDTQAYKQTLSELRNCYQHTHHFVRFVPSHCQATIQQLITEGWIM >Mature_287_residues MQTGLKIKIFEAGHCVHPSFVVKPGSGLKPRSFPAAVALIQHPTKGNILFDTGYHEHFFRATRPFPERFYAWTTPCHYQK ERGIVAQLAKEKIGPHEIEHLVLSHFHADHIAAVSEFAHSQLHCQQKGVDALTKSGRVGGVRKGYLKALLPQQLESNLVM HRDFSIPIGEILPHCQGVDLLCKDMFNDGLIYMVSLPGHAAGQVGLLVKREQGWLFLLADACWLIENLSENIDQHWLANL LCDDTQAYKQTLSELRNCYQHTHHFVRFVPSHCQATIQQLITEGWIM
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32466; Mature: 32466
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTGLKIKIFEAGHCVHPSFVVKPGSGLKPRSFPAAVALIQHPTKGNILFDTGYHEHFFR CCCCCEEEEEECCCEECCCEEECCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCHHHHHH ATRPFPERFYAWTTPCHYQKERGIVAQLAKEKIGPHEIEHLVLSHFHADHIAAVSEFAHS HCCCCCHHHEEECCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QLHCQQKGVDALTKSGRVGGVRKGYLKALLPQQLESNLVMHRDFSIPIGEILPHCQGVDL HHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCCCCCHHH LCKDMFNDGLIYMVSLPGHAAGQVGLLVKREQGWLFLLADACWLIENLSENIDQHWLANL HHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHH LCDDTQAYKQTLSELRNCYQHTHHFVRFVPSHCQATIQQLITEGWIM HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQTGLKIKIFEAGHCVHPSFVVKPGSGLKPRSFPAAVALIQHPTKGNILFDTGYHEHFFR CCCCCEEEEEECCCEECCCEEECCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCHHHHHH ATRPFPERFYAWTTPCHYQKERGIVAQLAKEKIGPHEIEHLVLSHFHADHIAAVSEFAHS HCCCCCHHHEEECCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QLHCQQKGVDALTKSGRVGGVRKGYLKALLPQQLESNLVMHRDFSIPIGEILPHCQGVDL HHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCCCCCHHH LCKDMFNDGLIYMVSLPGHAAGQVGLLVKREQGWLFLLADACWLIENLSENIDQHWLANL HHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHH LCDDTQAYKQTLSELRNCYQHTHHFVRFVPSHCQATIQQLITEGWIM HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA