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The map label for this gene is yajL [H]

Identifier: 27365161

GI number: 27365161

Start: 1806529

End: 1807128

Strand: Reverse

Name: yajL [H]

Synonym: VV1_1809

Alternate gene names: 27365161

Gene position: 1807128-1806529 (Counterclockwise)

Preceding gene: 326423894

Following gene: 27365160

Centisome position: 55.06

GC content: 50.0

Gene sequence:

>600_bases
ATGAATAAAAAAATCTTAGTGCCTATTGCTTGCGGTACCGAGGAAATGGAAGCGGTGACGGTCATCGATATGATGGCTCG
TGCTGGCTACGACGTTACGGTAGCCAGTGCCGATTTTGATGGTAAGCTGACCCTAACAGCCTCTCGTGGCGTTATCCTCG
GCGCACAATGTCGTTTGGTGGATGTGGCCGACGAACAGTTCGACGTCATTGTACTATCTGGTGGTGTCGCGGGGGCAGAA
ACCTTCCGCGATAGCCCAATTCTGATTGAGATGTTAAAACAGCATATGTATGAAGGGAAACTGGTCGCTGCCATTTGCGC
CGCCCCTGCACTGGTTTTGCAACATCACAATCTCTACCCTAAAGCCATCATGACTTGCCATCCAAACTTTATGTCTCATA
TCGGCGAGCAAAACTGGCGTCCTAAGCGCGTTACTTACGATGTGAACCACAATCTCCTTACCAGCCAAGGGCCAGGCACC
GCGCTGGAATTTGCCATGGAAATTATTATTTTACTTTCTGGCAAACAGCACGCGCGCCAAGTAGCAGAGCCTATGGTGAC
GGTACCGGTACTCAACTACCACAAACTGGGTGAAGAGTAA

Upstream 100 bases:

>100_bases
GATATTTGTTGCAAGCAGCGCATAAACACCAGATTGATGCAGCGGAAAACGCTAAACTTTATCAACACATCAAACAGATT
GAACAAAGCTGGACAGAACA

Downstream 100 bases:

>100_bases
TGTTTGACGTTCAAGCCATTCGCCAACAATTTCCCGCCTTGGCGCAACAAGTCAATCAAAACGAACTGGTTTATCTAGAT
AGTGCCGCGACAACACAAAA

Product: 4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MNKKILVPIACGTEEMEAVTVIDMMARAGYDVTVASADFDGKLTLTASRGVILGAQCRLVDVADEQFDVIVLSGGVAGAE
TFRDSPILIEMLKQHMYEGKLVAAICAAPALVLQHHNLYPKAIMTCHPNFMSHIGEQNWRPKRVTYDVNHNLLTSQGPGT
ALEFAMEIIILLSGKQHARQVAEPMVTVPVLNYHKLGEE

Sequences:

>Translated_199_residues
MNKKILVPIACGTEEMEAVTVIDMMARAGYDVTVASADFDGKLTLTASRGVILGAQCRLVDVADEQFDVIVLSGGVAGAE
TFRDSPILIEMLKQHMYEGKLVAAICAAPALVLQHHNLYPKAIMTCHPNFMSHIGEQNWRPKRVTYDVNHNLLTSQGPGT
ALEFAMEIIILLSGKQHARQVAEPMVTVPVLNYHKLGEE
>Mature_199_residues
MNKKILVPIACGTEEMEAVTVIDMMARAGYDVTVASADFDGKLTLTASRGVILGAQCRLVDVADEQFDVIVLSGGVAGAE
TFRDSPILIEMLKQHMYEGKLVAAICAAPALVLQHHNLYPKAIMTCHPNFMSHIGEQNWRPKRVTYDVNHNLLTSQGPGT
ALEFAMEIIILLSGKQHARQVAEPMVTVPVLNYHKLGEE

Specific function: Involved in biogenesis of ribosomal proteins, probably as a ribosomal protein-folding chaperone. Interacts with ribosomal subunits, ribosomes and polysomes. Confers resistance to oxidative stress [H]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C56 family [H]

Homologues:

Organism=Homo sapiens, GI183227678, Length=189, Percent_Identity=39.6825396825397, Blast_Score=113, Evalue=1e-25,
Organism=Homo sapiens, GI31543380, Length=189, Percent_Identity=39.6825396825397, Blast_Score=113, Evalue=1e-25,
Organism=Escherichia coli, GI87081736, Length=196, Percent_Identity=49.4897959183673, Blast_Score=186, Evalue=9e-49,
Organism=Caenorhabditis elegans, GI17531319, Length=182, Percent_Identity=33.5164835164835, Blast_Score=110, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17558714, Length=172, Percent_Identity=28.4883720930233, Blast_Score=91, Evalue=4e-19,
Organism=Drosophila melanogaster, GI28571932, Length=186, Percent_Identity=36.5591397849462, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24653499, Length=185, Percent_Identity=33.5135135135135, Blast_Score=87, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006287
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 21755; Mature: 21755

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKILVPIACGTEEMEAVTVIDMMARAGYDVTVASADFDGKLTLTASRGVILGAQCRLV
CCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCEEEECCEEEE
DVADEQFDVIVLSGGVAGAETFRDSPILIEMLKQHMYEGKLVAAICAAPALVLQHHNLYP
EECCCCEEEEEEECCCCCHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
KAIMTCHPNFMSHIGEQNWRPKRVTYDVNHNLLTSQGPGTALEFAMEIIILLSGKQHARQ
CCEEEECCHHHHHCCCCCCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHEECCCHHHHH
VAEPMVTVPVLNYHKLGEE
HHCCEEEEECCCHHCCCCC
>Mature Secondary Structure
MNKKILVPIACGTEEMEAVTVIDMMARAGYDVTVASADFDGKLTLTASRGVILGAQCRLV
CCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCEEEECCEEEE
DVADEQFDVIVLSGGVAGAETFRDSPILIEMLKQHMYEGKLVAAICAAPALVLQHHNLYP
EECCCCEEEEEEECCCCCHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
KAIMTCHPNFMSHIGEQNWRPKRVTYDVNHNLLTSQGPGTALEFAMEIIILLSGKQHARQ
CCEEEECCHHHHHCCCCCCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHEECCCHHHHH
VAEPMVTVPVLNYHKLGEE
HHCCEEEEECCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9592144 [H]