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The map label for this gene is ybaK [C]

Identifier: 27364924

GI number: 27364924

Start: 1526548

End: 1527060

Strand: Reverse

Name: ybaK [C]

Synonym: VV1_1555

Alternate gene names: 27364924

Gene position: 1527060-1526548 (Counterclockwise)

Preceding gene: 27364925

Following gene: 27364923

Centisome position: 46.53

GC content: 49.51

Gene sequence:

>513_bases
ATGACGAATAGTGATTTGTCCACAGCATTGACCCGCTATCTTGATGAGCAACAGGTGCCCTATCGTCTGTTGCCTCATCA
AACACCAGCAACCACCATCGAAGATGCAGCCAAACAGCGGGGGATTCGTCCTGCGCAAATGGTCAAATGCATTTTGCTGC
GTGATATGAGTGATCGCTATGTACTGGCGTGTGCACCAGGCGATCGCGCTGTTGATCCGAAAAAAGTCAGAGCATTAATG
GATTATCGGCGCATGACCTGTGTTGACAGTTCGCAAATTTATGCAATTACAGGATATCAACTGGGCACCGTGACTCCCCT
GTTACTGAAAACCCCTATGCCGATTGTCTTTGACCATGCACTCCAAGCGGAGTCGATGGTCACCATCAGCAGCGGAAACA
ATATGGCAGGAGTGGCTTTATCGTTAACAAGCCTAGCTCAACTCAGCCCCCCCATCTGGGCTGACATTTGTCGTTCTAGT
GAGCTAGGCACATTCCCAACCCACCAAAAGTAA

Upstream 100 bases:

>100_bases
CTCTTTGTGCTACCAAATGATCTGGAGCCCGAGACGCAATTTCGCCTAGCAGGTCAAAGTGAGCAATTGTGGCAACGAGA
GCCCCTACCGTATTCCCTCG

Downstream 100 bases:

>100_bases
TCGATTGCGCCCACAATTTGTGATCAACTTCAAATCAACAGAAAAATCCCAACAGAATTTTTAGTCACATTAAAAACATA
AATAGTCACGGCGATTATTT

Product: transcriptional regulator

Products: NA

Alternate protein names: Regulatory Protein; YbaK / Prolyl-TRNA Synthetases Associated Domain

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MTNSDLSTALTRYLDEQQVPYRLLPHQTPATTIEDAAKQRGIRPAQMVKCILLRDMSDRYVLACAPGDRAVDPKKVRALM
DYRRMTCVDSSQIYAITGYQLGTVTPLLLKTPMPIVFDHALQAESMVTISSGNNMAGVALSLTSLAQLSPPIWADICRSS
ELGTFPTHQK

Sequences:

>Translated_170_residues
MTNSDLSTALTRYLDEQQVPYRLLPHQTPATTIEDAAKQRGIRPAQMVKCILLRDMSDRYVLACAPGDRAVDPKKVRALM
DYRRMTCVDSSQIYAITGYQLGTVTPLLLKTPMPIVFDHALQAESMVTISSGNNMAGVALSLTSLAQLSPPIWADICRSS
ELGTFPTHQK
>Mature_169_residues
TNSDLSTALTRYLDEQQVPYRLLPHQTPATTIEDAAKQRGIRPAQMVKCILLRDMSDRYVLACAPGDRAVDPKKVRALMD
YRRMTCVDSSQIYAITGYQLGTVTPLLLKTPMPIVFDHALQAESMVTISSGNNMAGVALSLTSLAQLSPPIWADICRSSE
LGTFPTHQK

Specific function: May Be Involved In The Suppression Of Transcription Of Usha. [C]

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18755; Mature: 18624

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNSDLSTALTRYLDEQQVPYRLLPHQTPATTIEDAAKQRGIRPAQMVKCILLRDMSDRY
CCCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCE
VLACAPGDRAVDPKKVRALMDYRRMTCVDSSQIYAITGYQLGTVTPLLLKTPMPIVFDHA
EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHCCCCHHHHHH
LQAESMVTISSGNNMAGVALSLTSLAQLSPPIWADICRSSELGTFPTHQK
HCCCCEEEEECCCCEEHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TNSDLSTALTRYLDEQQVPYRLLPHQTPATTIEDAAKQRGIRPAQMVKCILLRDMSDRY
CCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCE
VLACAPGDRAVDPKKVRALMDYRRMTCVDSSQIYAITGYQLGTVTPLLLKTPMPIVFDHA
EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHCCCCHHHHHH
LQAESMVTISSGNNMAGVALSLTSLAQLSPPIWADICRSSELGTFPTHQK
HCCCCEEEEECCCCEEHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA